BLASTX nr result

ID: Glycyrrhiza24_contig00020549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020549
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...   185   3e-45
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   175   3e-42

>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/95 (90%), Positives = 89/95 (93%)
 Frame = +3

Query: 3   WNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMIENGFLPQKVTFETLYRGLIQ 182
           WNDM ESGVGPDLDSYTVLIHGLC  +KWREAC YFVEMIE GFLPQKVTFETLYRGLIQ
Sbjct: 409 WNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQ 468

Query: 183 SDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 287
           SDMLRTWRRLKK+LDQESITFGSEFQNY LKPY+R
Sbjct: 469 SDMLRTWRRLKKRLDQESITFGSEFQNYHLKPYKR 503


>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/95 (86%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   WNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMIENGFLPQKVTFETLYRGLIQ 182
           W DMKE+G GPDLD YTVLIHGLC R++WREACHYFVEMIENGFLP K TFE+LYRGLIQ
Sbjct: 416 WQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLPLKGTFESLYRGLIQ 475

Query: 183 SDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 287
           +DMLRTWRRLKKKLD+ESITFGSEFQNY LKPYRR
Sbjct: 476 ADMLRTWRRLKKKLDEESITFGSEFQNYQLKPYRR 510


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/95 (85%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   WNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMIENGFLPQKVTFETLYRGLIQ 182
           W D+K SG+GPDLDSYT+LIHGLC +EKWREAC +FVEMIE G LPQKVTFETLY+GLIQ
Sbjct: 454 WEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQ 513

Query: 183 SDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 287
           SDMLRTWRRLKKKLD+ESITFGSEFQNY LKPYRR
Sbjct: 514 SDMLRTWRRLKKKLDEESITFGSEFQNYQLKPYRR 548


>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  176 bits (445), Expect = 2e-42
 Identities = 77/95 (81%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   WNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMIENGFLPQKVTFETLYRGLIQ 182
           W+DMK SG GPDLDSYT+LIHGLC ++KW+EACH+FVEMIE G+LPQK+TFETLYRGLIQ
Sbjct: 431 WDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQ 490

Query: 183 SDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 287
           SDML+TWRRLKKKL++ESITFGSEFQ Y  KPYRR
Sbjct: 491 SDMLKTWRRLKKKLEEESITFGSEFQQYHFKPYRR 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  175 bits (444), Expect = 3e-42
 Identities = 77/95 (81%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   WNDMKESGVGPDLDSYTVLIHGLCRREKWREACHYFVEMIENGFLPQKVTFETLYRGLIQ 182
           W+DMK SG GPDLDSYT+LIHGLC ++KW+EACH+FVEMIE G+LPQK+TFETLYRGLIQ
Sbjct: 431 WDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQ 490

Query: 183 SDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 287
           SDML+TWRRLKKKL++ESITFGSEFQ Y  KPYRR
Sbjct: 491 SDMLKTWRRLKKKLEEESITFGSEFQXYHFKPYRR 525


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