BLASTX nr result

ID: Glycyrrhiza24_contig00020533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020533
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538436.1| PREDICTED: hydroxymethylglutaryl-CoA synthas...   231   6e-59
ref|XP_003517453.1| PREDICTED: hydroxymethylglutaryl-CoA synthas...   223   2e-56
ref|XP_003549866.1| PREDICTED: hydroxymethylglutaryl-CoA synthas...   211   9e-53
ref|XP_003611167.1| Hydroxymethylglutaryl-CoA synthase [Medicago...   207   2e-51
gb|AFK46199.1| unknown [Medicago truncatula]                          205   6e-51

>ref|XP_003538436.1| PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Glycine max]
          Length = 475

 Score =  231 bits (590), Expect = 6e-59
 Identities = 118/138 (85%), Positives = 124/138 (89%), Gaps = 3/138 (2%)
 Frame = -1

Query: 624 IHNKHSTLAGKRVVLFSYGSGLTATMFSLQFSDGQHPFSLSNIARVMDVAGKLKSRHEFP 445
           IHNK+STLAGKRV+LFSYGSGLTATMFSLQ  D QHPFSLSNIARVMDV GKLKSRHEFP
Sbjct: 340 IHNKNSTLAGKRVILFSYGSGLTATMFSLQLRDSQHPFSLSNIARVMDVDGKLKSRHEFP 399

Query: 444 PEKFIETLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKKARESSLAPAV 265
           PE+F+E LKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFY+KK +ESSL PA 
Sbjct: 400 PEEFVENLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYSKKTKESSLTPAE 459

Query: 264 NGVIPAVNGV---IANGH 220
           NGVI   NGV   IANGH
Sbjct: 460 NGVI--ANGVANGIANGH 475


>ref|XP_003517453.1| PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Glycine max]
          Length = 471

 Score =  223 bits (568), Expect = 2e-56
 Identities = 113/135 (83%), Positives = 121/135 (89%)
 Frame = -1

Query: 624 IHNKHSTLAGKRVVLFSYGSGLTATMFSLQFSDGQHPFSLSNIARVMDVAGKLKSRHEFP 445
           IHNKHSTLAGKRV+LFSYGSGLTATMFSLQ  D QHPFSLSN+ARVM+V GKLKSRHEFP
Sbjct: 340 IHNKHSTLAGKRVILFSYGSGLTATMFSLQLRDSQHPFSLSNMARVMNVDGKLKSRHEFP 399

Query: 444 PEKFIETLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKKARESSLAPAV 265
           PE+F+E LKLMEHRYG KEFVTSKD+SLLSPGTFYLTEVDSMYRRFY+KK +ESSL  A 
Sbjct: 400 PEEFVENLKLMEHRYGAKEFVTSKDSSLLSPGTFYLTEVDSMYRRFYSKKTKESSLTHAE 459

Query: 264 NGVIPAVNGVIANGH 220
           NGVI   NGV ANGH
Sbjct: 460 NGVI--ANGV-ANGH 471


>ref|XP_003549866.1| PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Glycine max]
          Length = 460

 Score =  211 bits (537), Expect = 9e-53
 Identities = 104/135 (77%), Positives = 113/135 (83%)
 Frame = -1

Query: 624 IHNKHSTLAGKRVVLFSYGSGLTATMFSLQFSDGQHPFSLSNIARVMDVAGKLKSRHEFP 445
           IHNKHSTL GKRV+LFSYGSGLT+TMFSL   +GQHPFSLSNI ++MDVAGKLKSRHEFP
Sbjct: 340 IHNKHSTLDGKRVILFSYGSGLTSTMFSLLLREGQHPFSLSNIDKMMDVAGKLKSRHEFP 399

Query: 444 PEKFIETLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKKARESSLAPAV 265
           PEKF+ET+KLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKK  E       
Sbjct: 400 PEKFVETMKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKKTSE------- 452

Query: 264 NGVIPAVNGVIANGH 220
                  NG++ NGH
Sbjct: 453 -------NGLVTNGH 460


>ref|XP_003611167.1| Hydroxymethylglutaryl-CoA synthase [Medicago truncatula]
           gi|355512502|gb|AES94125.1| Hydroxymethylglutaryl-CoA
           synthase [Medicago truncatula]
          Length = 471

 Score =  207 bits (526), Expect = 2e-51
 Identities = 101/129 (78%), Positives = 117/129 (90%)
 Frame = -1

Query: 624 IHNKHSTLAGKRVVLFSYGSGLTATMFSLQFSDGQHPFSLSNIARVMDVAGKLKSRHEFP 445
           +HNK+S+L GKRV+LFSYGSGLTATMFSLQ  + +HPFSLSNIARVMDVA KLKSRHEFP
Sbjct: 344 LHNKNSSLEGKRVILFSYGSGLTATMFSLQLRETKHPFSLSNIARVMDVAEKLKSRHEFP 403

Query: 444 PEKFIETLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKKARESSLAPAV 265
           P+KFIETLKLMEHRYG K++VTSKD+SLL+PGTFYLTEVD+MYRRFY  K+ ES+L PAV
Sbjct: 404 PQKFIETLKLMEHRYGAKDYVTSKDSSLLAPGTFYLTEVDTMYRRFYTTKSSESNLTPAV 463

Query: 264 NGVIPAVNG 238
           NG+  +VNG
Sbjct: 464 NGL--SVNG 470


>gb|AFK46199.1| unknown [Medicago truncatula]
          Length = 471

 Score =  205 bits (521), Expect = 6e-51
 Identities = 100/129 (77%), Positives = 116/129 (89%)
 Frame = -1

Query: 624 IHNKHSTLAGKRVVLFSYGSGLTATMFSLQFSDGQHPFSLSNIARVMDVAGKLKSRHEFP 445
           +HNK+S+L GKRV+LFSYGSGLTATMFSLQ  + +HPFSL NIARVMDVA KLKSRHEFP
Sbjct: 344 LHNKNSSLEGKRVILFSYGSGLTATMFSLQLRETKHPFSLPNIARVMDVAEKLKSRHEFP 403

Query: 444 PEKFIETLKLMEHRYGGKEFVTSKDTSLLSPGTFYLTEVDSMYRRFYAKKARESSLAPAV 265
           P+KFIETLKLMEHRYG K++VTSKD+SLL+PGTFYLTEVD+MYRRFY  K+ ES+L PAV
Sbjct: 404 PQKFIETLKLMEHRYGAKDYVTSKDSSLLAPGTFYLTEVDTMYRRFYTTKSSESNLTPAV 463

Query: 264 NGVIPAVNG 238
           NG+  +VNG
Sbjct: 464 NGL--SVNG 470


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