BLASTX nr result

ID: Glycyrrhiza24_contig00020515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020515
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539020.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   223   4e-56
ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   213   4e-53
ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago tr...   207   3e-51
ref|XP_004167350.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   171   2e-40
ref|XP_004150410.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   171   2e-40

>ref|XP_003539020.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Glycine max]
          Length = 1018

 Score =  223 bits (568), Expect = 4e-56
 Identities = 117/202 (57%), Positives = 132/202 (65%)
 Frame = +2

Query: 209 MEEKRRDXXXXXXXXXXXXXXXXXXXRRRAGAHKRKXXXXXXXXXXXXXXKRITREKATP 388
           MEEKRRD                   RRRAGA+KRK              KR +R+KA+P
Sbjct: 1   MEEKRRDAAPSAADSPASEPATS---RRRAGANKRKSGALSASGSSSAPSKRASRDKASP 57

Query: 389 LHTPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSVAEQIKRE 568
           LH PPLHNGPLTRARQ P+NL                              ++AEQ+K+E
Sbjct: 58  LHPPPLHNGPLTRARQTPNNLASASSSAGASAPAAVKRSERAHPSAAESA-ALAEQLKKE 116

Query: 569 SEWESLEASIEAEFEAIRSRGTNAHVVPTHCGWFSWSNIHPIEKRMLPSFFNDKTENRTP 748
           SEWE+LEA+IEAEFEAIRSRG NAHVVPTH GWFSWS IHPIEK+MLPSFFN KT+NRTP
Sbjct: 117 SEWETLEAAIEAEFEAIRSRGANAHVVPTHSGWFSWSCIHPIEKQMLPSFFNSKTDNRTP 176

Query: 749 DIYMEMRNWIMKKFHSNPNVQI 814
           D+YME+RNWIMKKFHSNPNVQI
Sbjct: 177 DVYMEIRNWIMKKFHSNPNVQI 198


>ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Glycine max]
          Length = 1016

 Score =  213 bits (542), Expect = 4e-53
 Identities = 114/202 (56%), Positives = 128/202 (63%)
 Frame = +2

Query: 209 MEEKRRDXXXXXXXXXXXXXXXXXXXRRRAGAHKRKXXXXXXXXXXXXXXKRITREKATP 388
           MEEKRRD                   RRRAGA+KRK              KR  R+KA+P
Sbjct: 1   MEEKRRDAAPSAADSPASEPATS---RRRAGANKRKFGTLSASGSSSAPSKRAARDKASP 57

Query: 389 LHTPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSVAEQIKRE 568
           L  P  HNGPLTRARQ P+NL                              ++AEQ+K+E
Sbjct: 58  LFPPAPHNGPLTRARQTPNNLSASSSAAASAPAAVKRSERAHPSAAE--STALAEQLKKE 115

Query: 569 SEWESLEASIEAEFEAIRSRGTNAHVVPTHCGWFSWSNIHPIEKRMLPSFFNDKTENRTP 748
           SEWE+LEA+IEAEFEAIRSRG NAHVVPTHCGWFSWS IHPIEK+MLPSFF+ KTENRT 
Sbjct: 116 SEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWSCIHPIEKQMLPSFFSGKTENRTS 175

Query: 749 DIYMEMRNWIMKKFHSNPNVQI 814
           D+YME+RNWIMKKFHSNPNVQI
Sbjct: 176 DVYMEIRNWIMKKFHSNPNVQI 197


>ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago truncatula]
           gi|355507940|gb|AES89082.1| SWI/SNF complex subunit
           SMARCC1 [Medicago truncatula]
          Length = 1041

 Score =  207 bits (526), Expect = 3e-51
 Identities = 104/176 (59%), Positives = 117/176 (66%)
 Frame = +2

Query: 287 RRRAGAHKRKXXXXXXXXXXXXXXKRITREKATPLHTPPLHNGPLTRARQIPSNLXXXXX 466
           RRRAG +KRK              KRITREKA+PLH PP HNGPLTRARQIP+N      
Sbjct: 21  RRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHNGPLTRARQIPNNSSAAAN 80

Query: 467 XXXXXXXXXXXXXXXXXXXXXXXGDSVAEQIKRESEWESLEASIEAEFEAIRSRGTNAHV 646
                                    +  +  K+ESEWES+EA IEAEF+AIRSR  NAHV
Sbjct: 81  SSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKAIRSRDANAHV 140

Query: 647 VPTHCGWFSWSNIHPIEKRMLPSFFNDKTENRTPDIYMEMRNWIMKKFHSNPNVQI 814
           VPTHCGWFSWS+IH IEKRM+PSFFN  +ENRTPD YME+RNWIMKKFHSNPN+QI
Sbjct: 141 VPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQI 196


>ref|XP_004167350.1| PREDICTED: SWI/SNF complex subunit SWI3D-like, partial [Cucumis
           sativus]
          Length = 835

 Score =  171 bits (432), Expect = 2e-40
 Identities = 91/205 (44%), Positives = 115/205 (56%), Gaps = 3/205 (1%)
 Frame = +2

Query: 209 MEEKRRDXXXXXXXXXXXXXXXXXXXRRRAGAHKRKXXXXXXXXXXXXXXKRITREKATP 388
           ME+KRRD                   RRRAGAHKRK              KR+TR+K+  
Sbjct: 1   MEDKRRDTANIPSNTTDSPSSEPPSSRRRAGAHKRKASALGASNTLSAPSKRVTRDKSAL 60

Query: 389 LHTPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGD---SVAEQI 559
            H PP HNGP TRAR  P+N+                            GD   S AE++
Sbjct: 61  SH-PPNHNGPFTRARLGPNNVAGAASAGGLAPGSVKADGSLLHSEVQR-GDALLSAAEEL 118

Query: 560 KRESEWESLEASIEAEFEAIRSRGTNAHVVPTHCGWFSWSNIHPIEKRMLPSFFNDKTEN 739
            + +   +LEAS E ++EAI+SRG N HVVP HCGWFSW+ +HPIE+R L +FF+ K  N
Sbjct: 119 NKATRLANLEASFEVDYEAIKSRGANVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKAAN 178

Query: 740 RTPDIYMEMRNWIMKKFHSNPNVQI 814
           R+PDIY+E+RNWIMKKFH+NP+ QI
Sbjct: 179 RSPDIYIEIRNWIMKKFHANPSTQI 203


>ref|XP_004150410.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Cucumis sativus]
          Length = 1024

 Score =  171 bits (432), Expect = 2e-40
 Identities = 91/205 (44%), Positives = 115/205 (56%), Gaps = 3/205 (1%)
 Frame = +2

Query: 209 MEEKRRDXXXXXXXXXXXXXXXXXXXRRRAGAHKRKXXXXXXXXXXXXXXKRITREKATP 388
           ME+KRRD                   RRRAGAHKRK              KR+TR+K+  
Sbjct: 1   MEDKRRDTANIPSNTTDSPSSEPPSSRRRAGAHKRKASALGASNTLSAPSKRVTRDKSAL 60

Query: 389 LHTPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGD---SVAEQI 559
            H PP HNGP TRAR  P+N+                            GD   S AE++
Sbjct: 61  SH-PPNHNGPFTRARLGPNNVAGAASAGGLAPGSVKADGSLLHSEVQR-GDALLSAAEEL 118

Query: 560 KRESEWESLEASIEAEFEAIRSRGTNAHVVPTHCGWFSWSNIHPIEKRMLPSFFNDKTEN 739
            + +   +LEAS E ++EAI+SRG N HVVP HCGWFSW+ +HPIE+R L +FF+ K  N
Sbjct: 119 NKATRLANLEASFEVDYEAIKSRGANVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKAAN 178

Query: 740 RTPDIYMEMRNWIMKKFHSNPNVQI 814
           R+PDIY+E+RNWIMKKFH+NP+ QI
Sbjct: 179 RSPDIYIEIRNWIMKKFHANPSTQI 203


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