BLASTX nr result

ID: Glycyrrhiza24_contig00020473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020473
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas...   169   6e-40
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             138   1e-30
ref|XP_003522113.1| PREDICTED: uncharacterized protein LOC100796...   136   3e-30
ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786...   135   6e-30
ref|XP_003557039.1| PREDICTED: uncharacterized protein LOC100778...   126   4e-27

>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 386

 Score =  169 bits (427), Expect = 6e-40
 Identities = 96/198 (48%), Positives = 125/198 (63%), Gaps = 6/198 (3%)
 Frame = +1

Query: 1   LLVDKQVLVAFEIGKYKDEMLCDVVPMEAGHMLLGRPWQYDRKVTHDGVSNKFSFVHNAL 180
           LLVDKQVLV F IGKY DE+LCDVVPMEAGH+LLGRPWQ+DR V HDG +N F+FVH   
Sbjct: 11  LLVDKQVLVNFSIGKYNDEILCDVVPMEAGHILLGRPWQFDRNVFHDGKANTFTFVHKKH 70

Query: 181 KITLVPLSPREVCEDQVKLXXXXXXXXXXXXXXXNVREKTTXXXXXXXXXXXXXXXXXXX 360
           KI+L+PLSP+E+C+D++ L                ++EK +                   
Sbjct: 71  KISLLPLSPKEICQDELTL---------KLKREKEIKEK-SGKSIMHANESHNHDPTPRV 120

Query: 361 XSLIIRESEVKRALLARQSMH------ICLNANTNSLPSVDGSVLKGFADVFPKEVFHGS 522
            SL IRE  V +ALL+R+ ++      +CL+A+ + +PS    +LK FADVFPKE+ HG 
Sbjct: 121 ESLFIREHVVGKALLSRKPIYFLYCNDLCLSASHDVIPSSLNYLLKDFADVFPKELPHG- 179

Query: 523 LQPMRGIEPQTDLLPIAS 576
           L P+RGIE   DL+P AS
Sbjct: 180 LPPLRGIEHHIDLIPSAS 197


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  138 bits (347), Expect = 1e-30
 Identities = 83/201 (41%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
 Frame = +1

Query: 1   LLVDKQVLVAFEIGKYKDEMLCDVVPMEAGHMLLGRPWQYDRKVTHDGVSNKFSFVHNAL 180
           +LV+KQV + F+IGKY+D +LCDVVPMEA H+LLGRPWQ+DRK  HDG SNK+SF+++  
Sbjct: 420 MLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQ 479

Query: 181 KITLVPLSPREVCEDQVKLXXXXXXXXXXXXXXXNVREKTTXXXXXXXXXXXXXXXXXXX 360
           KI LVPL+P EV EDQ K+                  EK                     
Sbjct: 480 KINLVPLNPSEVREDQRKMSEKYDQERKEKEKEKEKNEK------------KKNDKREKK 527

Query: 361 XSLIIRESEVKRALLARQSMHICL---------NANTNSLPSVDGSVLKGFADVFPKEVF 513
            SLI +  +VK A+++ Q +++            +N   LP+   S+L+ F ++FP+EV 
Sbjct: 528 QSLIAKIRDVKEAIVSHQPLYLLFCKEVPLLTTISNEKKLPNCIESLLQEFKELFPEEVP 587

Query: 514 HGSLQPMRGIEPQTDLLPIAS 576
            G L P+RGIE   DL P AS
Sbjct: 588 SG-LPPIRGIEHHIDLNPGAS 607


>ref|XP_003522113.1| PREDICTED: uncharacterized protein LOC100796705 [Glycine max]
          Length = 1010

 Score =  136 bits (343), Expect = 3e-30
 Identities = 86/201 (42%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
 Frame = +1

Query: 7    VDKQVLVAFEIGKYKDEMLCDVVPMEAGHMLLGRPWQYDRKVTHDGVSNKFSFVHNALKI 186
            V +QV V   IGKY D++LCDVVPMEA H+LLGRPWQ+D++  HDG +NK SF+H   KI
Sbjct: 407  VRQQVEVDVYIGKYNDKVLCDVVPMEASHLLLGRPWQFDKRANHDGYTNKISFMHQDKKI 466

Query: 187  TLVPLSPREVCEDQVKLXXXXXXXXXXXXXXXNV--REKTTXXXXXXXXXXXXXXXXXXX 360
             L PLSP+EVCEDQ K+                    EK                     
Sbjct: 467  VLKPLSPQEVCEDQKKMREKLFQEKREKEKVSKTLESEKKRETLERKKSEQKKSETLEVR 526

Query: 361  XSLIIRESEVKRALLARQSMHI--CLN--ANTNS-----LPSVDGSVLKGFADVFPKEVF 513
             S +  +SEVKR   A+QS++I  C N    TN+     +PS   ++L+ F D+FP  V 
Sbjct: 527  ESYLATKSEVKRLFRAKQSLYILFCKNQILTTNTFDEFEVPSSVKTLLQDFQDMFPPNVP 586

Query: 514  HGSLQPMRGIEPQTDLLPIAS 576
             G L P+RGIE Q DL+P AS
Sbjct: 587  SG-LPPLRGIEHQIDLIPGAS 606


>ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786304 [Glycine max]
          Length = 1317

 Score =  135 bits (341), Expect = 6e-30
 Identities = 86/201 (42%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
 Frame = +1

Query: 7    VDKQVLVAFEIGKYKDEMLCDVVPMEAGHMLLGRPWQYDRKVTHDGVSNKFSFVHNALKI 186
            V +QV V   IGKY D++LCDVVPMEA H+LLGRPWQ+D++V HDG +NK SF+H   KI
Sbjct: 765  VRQQVEVDVSIGKYNDKVLCDVVPMEASHILLGRPWQFDKRVNHDGYTNKISFMHQDKKI 824

Query: 187  TLVPLSPREVCEDQVKLXXXXXXXXXXXXXXXNV--REKTTXXXXXXXXXXXXXXXXXXX 360
             L PLSP+EVCEDQ K+                    EK                     
Sbjct: 825  VLKPLSPQEVCEDQKKMREKLLQEKREKEKVSKTLESEKKRETLERKKSEQKKSETLEVR 884

Query: 361  XSLIIRESEVKRALLARQSMHI--CLN--ANTNS-----LPSVDGSVLKGFADVFPKEVF 513
             S +  +SEVKR   A+Q ++I  C N    TN+     +PS   ++L+ F D+FP  V 
Sbjct: 885  ESYLATKSEVKRLFRAKQLLYILFCKNQILTTNTFDDFEVPSSVKTLLQDFHDMFPPNVP 944

Query: 514  HGSLQPMRGIEPQTDLLPIAS 576
             G L P+RGIE Q DL+P AS
Sbjct: 945  SG-LPPLRGIEHQIDLIPGAS 964


>ref|XP_003557039.1| PREDICTED: uncharacterized protein LOC100778333, partial [Glycine
            max]
          Length = 692

 Score =  126 bits (317), Expect = 4e-27
 Identities = 82/199 (41%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
 Frame = +1

Query: 7    VDKQVLVAFEIGKYKDEMLCDVVPMEAGHMLLGRPWQYDRKVTHDGVSNKFSFVHNALKI 186
            V +QV V   IG+Y D++LCDVVPMEA H+LLGRPWQYD K  HDG +NK SF     KI
Sbjct: 443  VTQQVEVCLTIGRYNDKVLCDVVPMEATHVLLGRPWQYDTKAVHDGFTNKISFKQADKKI 502

Query: 187  TLVPLSPREVCEDQVKLXXXXXXXXXXXXXXXNVREKTTXXXXXXXXXXXXXXXXXXXXS 366
             L PLSP+EVCEDQ+K+                 + +T                      
Sbjct: 503  VLKPLSPQEVCEDQIKMREKKKSETLEKEKRGKKKSETLEREKRENKKSETLEGKQL--- 559

Query: 367  LIIRESEVKRALLARQSMHI------CLNAN---TNSLPSVDGSVLKGFADVFPKEVFHG 519
             +  + EV+R L ARQ +++       L+AN      LPS   S+L+ F DVFP  V  G
Sbjct: 560  YLATKREVRRVLCARQPLYLLFSQRQMLHANPIDEFKLPSSIQSLLQDFDDVFPASVPDG 619

Query: 520  SLQPMRGIEPQTDLLPIAS 576
             L  +RGIE   DL+P AS
Sbjct: 620  -LPLLRGIEHHIDLIPGAS 637


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