BLASTX nr result

ID: Glycyrrhiza24_contig00020464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020464
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   196   1e-48
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   194   6e-48
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   194   6e-48
dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]                     193   1e-47
ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arab...   193   1e-47

>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  196 bits (499), Expect = 1e-48
 Identities = 95/101 (94%), Positives = 99/101 (98%)
 Frame = +1

Query: 1   VYVGTRASREVCQQYEFYNDKKAGRPTKFNALLTTYEVVLKDKSVLSKIKWNYLMVDEAH 180
           VYVGTRASREVCQQYEFYNDKK G+P KFNALLTTYEV+LKDK+VLSKIKWNYLMVDEAH
Sbjct: 696 VYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVILKDKAVLSKIKWNYLMVDEAH 755

Query: 181 RLKNSEAQLYTTLLEFSTKNKLLITGTPLQNSVEELWALLH 303
           RLKNSEAQLYT+LLEFSTKNKLLITGTPLQNSVEELWALLH
Sbjct: 756 RLKNSEAQLYTSLLEFSTKNKLLITGTPLQNSVEELWALLH 796


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  194 bits (493), Expect = 6e-48
 Identities = 94/101 (93%), Positives = 98/101 (97%)
 Frame = +1

Query: 1    VYVGTRASREVCQQYEFYNDKKAGRPTKFNALLTTYEVVLKDKSVLSKIKWNYLMVDEAH 180
            +YVGTRASREVCQQYEFYN+KK G+P KFNALLTTYEVVLKDK+VLSKIKWNYLMVDEAH
Sbjct: 711  IYVGTRASREVCQQYEFYNEKKPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAH 770

Query: 181  RLKNSEAQLYTTLLEFSTKNKLLITGTPLQNSVEELWALLH 303
            RLKNSEAQLYTTL EFSTKNKLLITGTPLQNSVEELWALLH
Sbjct: 771  RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 811


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  194 bits (493), Expect = 6e-48
 Identities = 94/101 (93%), Positives = 98/101 (97%)
 Frame = +1

Query: 1    VYVGTRASREVCQQYEFYNDKKAGRPTKFNALLTTYEVVLKDKSVLSKIKWNYLMVDEAH 180
            +YVGTRASREVCQQYEFYN+KK G+P KFNALLTTYEVVLKDK+VLSKIKWNYLMVDEAH
Sbjct: 714  IYVGTRASREVCQQYEFYNEKKPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAH 773

Query: 181  RLKNSEAQLYTTLLEFSTKNKLLITGTPLQNSVEELWALLH 303
            RLKNSEAQLYTTL EFSTKNKLLITGTPLQNSVEELWALLH
Sbjct: 774  RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 814


>dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
          Length = 1221

 Score =  193 bits (490), Expect = 1e-47
 Identities = 95/101 (94%), Positives = 97/101 (96%)
 Frame = +1

Query: 1    VYVGTRASREVCQQYEFYNDKKAGRPTKFNALLTTYEVVLKDKSVLSKIKWNYLMVDEAH 180
            VYVGTRASREVCQQYEFYN+KK GRP KFNALLTTYEVVLKDK+VLSKIKW YLMVDEAH
Sbjct: 704  VYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAH 763

Query: 181  RLKNSEAQLYTTLLEFSTKNKLLITGTPLQNSVEELWALLH 303
            RLKNSEAQLYT LLEFSTKNKLLITGTPLQNSVEELWALLH
Sbjct: 764  RLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLH 804


>ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
            lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein
            ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata]
          Length = 1721

 Score =  193 bits (490), Expect = 1e-47
 Identities = 95/101 (94%), Positives = 97/101 (96%)
 Frame = +1

Query: 1    VYVGTRASREVCQQYEFYNDKKAGRPTKFNALLTTYEVVLKDKSVLSKIKWNYLMVDEAH 180
            VYVGTRASREVCQQYEFYN+KK GRP KFNALLTTYEVVLKDK+VLSKIKW YLMVDEAH
Sbjct: 701  VYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAH 760

Query: 181  RLKNSEAQLYTTLLEFSTKNKLLITGTPLQNSVEELWALLH 303
            RLKNSEAQLYT LLEFSTKNKLLITGTPLQNSVEELWALLH
Sbjct: 761  RLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLH 801


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