BLASTX nr result

ID: Glycyrrhiza24_contig00020460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020460
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   213   7e-53
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_002529751.1| conserved hypothetical protein [Ricinus comm...   206   5e-51
ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
ref|XP_002264261.1| PREDICTED: INO80 complex subunit D [Vitis vi...   177   3e-42

>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  213 bits (541), Expect = 7e-53
 Identities = 104/184 (56%), Positives = 126/184 (68%), Gaps = 19/184 (10%)
 Frame = +1

Query: 253 SNCYRDIYWALMGRLKALYTHYLWACGLSPFKDDADSL-------------HNFTFRCD- 390
           S C++D YWALM  LK  Y  Y W  G+SPFK+D  +               N T   D 
Sbjct: 67  SKCFKDHYWALMEELKIQYREYYWEYGVSPFKEDHQNTLQKQEQQKQGVIGENNTNVSDL 126

Query: 391 -----CTFLGCSFKAMPLTTFCHLHILSDSCQKLYKPCNYVIKCAQAGPITCGKPILRSI 555
                C F+GC  KAM LT+FCHLHILSD+ QKLYKPC YVIK AQAGPITCGKPILRS 
Sbjct: 127 KSNHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRST 186

Query: 556 VPSLCTVHFQKAQKHLTRTFKRTGLNISSTSKMAPKFHVLVTEYVHHIQVKRRKELKGNE 735
            PSLCT+H QKAQKH+T+  ++ GLN+SS+SK+APKFHV+VTEYV  IQ +R+   +GN 
Sbjct: 187 APSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQFRRKAAERGNR 246

Query: 736 SKIV 747
           SK++
Sbjct: 247 SKVM 250


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  209 bits (531), Expect = 1e-51
 Identities = 105/201 (52%), Positives = 128/201 (63%), Gaps = 36/201 (17%)
 Frame = +1

Query: 253 SNCYRDIYWALMGRLKALYTHYLWACGLSPFKDDADSLH--------------------- 369
           S C++D YWALM  LK  Y  Y W  G+SPFK+D ++L                      
Sbjct: 80  SKCFKDHYWALMEELKIQYREYYWEYGVSPFKEDQNTLQKQEQQKQGGGIGVLERENEES 139

Query: 370 ---------NFTFRCD------CTFLGCSFKAMPLTTFCHLHILSDSCQKLYKPCNYVIK 504
                    N T   D      C F+GC  KAM LT+FCHLHILSD+ QKLYKPC YVIK
Sbjct: 140 GANIEVIGENNTNVSDLKSNHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIK 199

Query: 505 CAQAGPITCGKPILRSIVPSLCTVHFQKAQKHLTRTFKRTGLNISSTSKMAPKFHVLVTE 684
            AQAGPITCGKPILRS  PSLCT+H QKAQKH+T+  ++ GLN+SS+SK+APKFHV+VTE
Sbjct: 200 SAQAGPITCGKPILRSTAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 259

Query: 685 YVHHIQVKRRKELKGNESKIV 747
           YV  IQ +R+   +GN SK++
Sbjct: 260 YVRQIQFRRKAAERGNRSKVM 280


>ref|XP_002529751.1| conserved hypothetical protein [Ricinus communis]
           gi|223530749|gb|EEF32617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score =  206 bits (525), Expect = 5e-51
 Identities = 108/213 (50%), Positives = 122/213 (57%), Gaps = 50/213 (23%)
 Frame = +1

Query: 253 SNCYRDIYWALMGRLKALYTHYLWACGLSPFKDDADSL---------------------- 366
           S CYRD YWALM  LK  Y  Y W  G+SPFKDD  SL                      
Sbjct: 91  SKCYRDYYWALMEDLKVQYREYYWKYGVSPFKDDHPSLLQRQQKAEHGVERESGEREGGG 150

Query: 367 ----------------------------HNFTFRCDCTFLGCSFKAMPLTTFCHLHILSD 462
                                       +N      C F+GC  KAM LT+FCHLHILSD
Sbjct: 151 NTVNNEVIGENNNNGVKGGFGGDMEMKSNNSNNNNRCLFVGCKLKAMALTSFCHLHILSD 210

Query: 463 SCQKLYKPCNYVIKCAQAGPITCGKPILRSIVPSLCTVHFQKAQKHLTRTFKRTGLNISS 642
           + QKLYKPC YVIK AQAGPITCGKPILRS  PSLCTVHFQKAQKH+TR  K+ GLN+SS
Sbjct: 211 AKQKLYKPCGYVIKSAQAGPITCGKPILRSSAPSLCTVHFQKAQKHVTRALKKAGLNVSS 270

Query: 643 TSKMAPKFHVLVTEYVHHIQVKRRKELKGNESK 741
           +SK+APKFHV+V EYV  IQ +R+   + N  K
Sbjct: 271 SSKLAPKFHVIVAEYVRQIQARRKATRRANRIK 303


>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  205 bits (521), Expect = 2e-50
 Identities = 102/191 (53%), Positives = 123/191 (64%), Gaps = 37/191 (19%)
 Frame = +1

Query: 253 SNCYRDIYWALMGRLKALYTHYLWACGLSPFKDD-------------------------- 354
           S C++D YWALM  LK LY  Y W  G+SPFK+D                          
Sbjct: 83  SKCFKDYYWALMEELKVLYREYYWKYGVSPFKEDHHNTLQKVEQHKQGGGFGVLERENGE 142

Query: 355 --------ADSLHNFT---FRCDCTFLGCSFKAMPLTTFCHLHILSDSCQKLYKPCNYVI 501
                    ++ +NF+       C F+GC  KAM LT+FCHLHILSD+ QKLYKPC YVI
Sbjct: 143 GEANIEVIGENNNNFSDLKSNHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVI 202

Query: 502 KCAQAGPITCGKPILRSIVPSLCTVHFQKAQKHLTRTFKRTGLNISSTSKMAPKFHVLVT 681
           K AQAGPITCGKPILRS  P+LCTVHFQKAQKH+T+  ++ GLN+SS+SK+APKFHV+VT
Sbjct: 203 KSAQAGPITCGKPILRSTAPALCTVHFQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVT 262

Query: 682 EYVHHIQVKRR 714
           EYV  IQ KR+
Sbjct: 263 EYVRQIQAKRK 273


>ref|XP_002264261.1| PREDICTED: INO80 complex subunit D [Vitis vinifera]
          Length = 279

 Score =  177 bits (450), Expect = 3e-42
 Identities = 90/181 (49%), Positives = 110/181 (60%), Gaps = 19/181 (10%)
 Frame = +1

Query: 259 CYRDIYWALMGRLKALYTHYLWACGLSPFKDDAD-------------SLHNFTFRCD--- 390
           CYRD YW++M  +K  +  Y W  G+SP   D                     F  D   
Sbjct: 84  CYRDYYWSIMEEVKIHHREYYWKYGVSPIMADQSRESGVEANGGSNGKNDELGFDGDGGG 143

Query: 391 ---CTFLGCSFKAMPLTTFCHLHILSDSCQKLYKPCNYVIKCAQAGPITCGKPILRSIVP 561
              C  +GC  KAM LT FC+LHIL D  Q+LYKPC+YVIK AQ GPITCGKPIL+S  P
Sbjct: 144 SQQCASVGCKTKAMALTRFCYLHILCDPKQQLYKPCHYVIKRAQTGPITCGKPILKSSDP 203

Query: 562 SLCTVHFQKAQKHLTRTFKRTGLNISSTSKMAPKFHVLVTEYVHHIQVKRRKELKGNESK 741
            LCTVH QKAQKHL R  K++G N++S+SK APKFHV+  EYVH IQ KRR   + N+ +
Sbjct: 204 DLCTVHLQKAQKHLHRALKKSGFNVASSSKPAPKFHVIAAEYVHQIQEKRRAAQRENKHE 263

Query: 742 I 744
           +
Sbjct: 264 V 264


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