BLASTX nr result

ID: Glycyrrhiza24_contig00020454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020454
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like ...   179   3e-43
ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like ...   170   1e-40
emb|CBI16118.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Viti...   166   2e-39
ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana] ...   162   4e-38

>ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 389

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/150 (58%), Positives = 101/150 (67%), Gaps = 3/150 (2%)
 Frame = -2

Query: 528 VDNFAHXXXXXXXXXXXXXXXIRPQYKWVSQR--NSHSRYAAPPVNSKHKPYQYVLWVVS 355
           VDNFAH               IRPQ+KWVS R  NSHS  AAP V  KHKPYQY LWV+S
Sbjct: 240 VDNFAHIGGFVSGFLLGFIFLIRPQFKWVSSRHRNSHSSAAAPSVKYKHKPYQYALWVIS 299

Query: 354 FMXXXXXXXXXXXXXXXXXXLNDHCSWCHYLSCVPTSKWSCKPQEVYCESSQIGNQLNMT 175
           F+                  LND CSWCHYLSC+PTSKWSCK Q++YCES+QIGNQLN+T
Sbjct: 300 FILLIAGLVTGLVLLLRSANLNDRCSWCHYLSCIPTSKWSCKSQQLYCESTQIGNQLNIT 359

Query: 174 CLGNGRSGIFPVTNSSPSQA-QQLCSHLCS 88
           CL NGRS +FP++N+S S+A QQLCS LCS
Sbjct: 360 CLSNGRSDMFPLSNTSTSEAQQQLCSRLCS 389


>ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 392

 Score =  170 bits (431), Expect = 1e-40
 Identities = 86/150 (57%), Positives = 98/150 (65%), Gaps = 3/150 (2%)
 Frame = -2

Query: 528 VDNFAHXXXXXXXXXXXXXXXIRPQYKWVSQR--NSHSRYAAPPVNSKHKPYQYVLWVVS 355
           VDNFAH               IRPQ+KWVS R  NSHS  AAP V  KHKPYQY LWV+S
Sbjct: 243 VDNFAHIGGFVSGFFLGFIFLIRPQFKWVSSRHRNSHSTAAAPSVKYKHKPYQYALWVIS 302

Query: 354 FMXXXXXXXXXXXXXXXXXXLNDHCSWCHYLSCVPTSKWSCKPQEVYCESSQIGNQLNMT 175
           F+                  LND CSWCHYLSCVPTSKWSCK Q++YCES+QI NQLN+T
Sbjct: 303 FILLIAGLVTGLVLLLRGVNLNDRCSWCHYLSCVPTSKWSCKSQQLYCESTQIRNQLNIT 362

Query: 174 CLGNGRSGIFPVTNSSPSQA-QQLCSHLCS 88
           CL NGRS +FP+++ S  +A QQLCS LCS
Sbjct: 363 CLSNGRSHMFPLSDISSLEAQQQLCSQLCS 392


>emb|CBI16118.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/147 (53%), Positives = 92/147 (62%)
 Frame = -2

Query: 528 VDNFAHXXXXXXXXXXXXXXXIRPQYKWVSQRNSHSRYAAPPVNSKHKPYQYVLWVVSFM 349
           VDNFAH               IRPQ+ WVSQRN+   + AP V  KHK YQYVLWV+S +
Sbjct: 170 VDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLI 229

Query: 348 XXXXXXXXXXXXXXXXXXLNDHCSWCHYLSCVPTSKWSCKPQEVYCESSQIGNQLNMTCL 169
                              ND CSWCHYLSCVPTSKWSCK Q+VYCES+ IGNQLN+TCL
Sbjct: 230 LLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQLNLTCL 289

Query: 168 GNGRSGIFPVTNSSPSQAQQLCSHLCS 88
            NGRS I+ + + + SQ QQLCS LC+
Sbjct: 290 SNGRSNIYLLPDDNTSQVQQLCSQLCN 316


>ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
          Length = 391

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/147 (53%), Positives = 92/147 (62%)
 Frame = -2

Query: 528 VDNFAHXXXXXXXXXXXXXXXIRPQYKWVSQRNSHSRYAAPPVNSKHKPYQYVLWVVSFM 349
           VDNFAH               IRPQ+ WVSQRN+   + AP V  KHK YQYVLWV+S +
Sbjct: 245 VDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLI 304

Query: 348 XXXXXXXXXXXXXXXXXXLNDHCSWCHYLSCVPTSKWSCKPQEVYCESSQIGNQLNMTCL 169
                              ND CSWCHYLSCVPTSKWSCK Q+VYCES+ IGNQLN+TCL
Sbjct: 305 LLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQLNLTCL 364

Query: 168 GNGRSGIFPVTNSSPSQAQQLCSHLCS 88
            NGRS I+ + + + SQ QQLCS LC+
Sbjct: 365 SNGRSNIYLLPDDNTSQVQQLCSQLCN 391


>ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
           gi|110737035|dbj|BAF00472.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253108|gb|AEC08202.1|
           protein RHOMBOID-like 1 [Arabidopsis thaliana]
          Length = 389

 Score =  162 bits (409), Expect = 4e-38
 Identities = 75/146 (51%), Positives = 91/146 (62%)
 Frame = -2

Query: 528 VDNFAHXXXXXXXXXXXXXXXIRPQYKWVSQRNSHSRYAAPPVNSKHKPYQYVLWVVSFM 349
           VDNFAH               IRPQY + +QRN+   YAAP   SKHKPYQYVLW+ S +
Sbjct: 243 VDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLV 302

Query: 348 XXXXXXXXXXXXXXXXXXLNDHCSWCHYLSCVPTSKWSCKPQEVYCESSQIGNQLNMTCL 169
                             LN HCSWCHYLSC+PTS WSCK Q VYCESSQIG Q+N+TC+
Sbjct: 303 LLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCKSQNVYCESSQIGQQMNLTCI 362

Query: 168 GNGRSGIFPVTNSSPSQAQQLCSHLC 91
            NG++ ++ ++N  PS+ QQLCS LC
Sbjct: 363 TNGKTEMYKLSNDIPSRIQQLCSQLC 388


Top