BLASTX nr result

ID: Glycyrrhiza24_contig00020452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020452
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528075.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   177   6e-43
emb|CBI21636.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_003632523.1| PREDICTED: uncharacterized protein LOC100854...   123   2e-26
gb|EEE70274.1| hypothetical protein OsJ_30421 [Oryza sativa Japo...   104   9e-21
gb|EEC85097.1| hypothetical protein OsI_32469 [Oryza sativa Indi...   104   9e-21

>ref|XP_003528075.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Glycine max]
          Length = 342

 Score =  177 bits (450), Expect = 6e-43
 Identities = 84/128 (65%), Positives = 106/128 (82%)
 Frame = -3

Query: 385 EPAEKDLLKMAEKLESEKLPKIKFNSTHMIDLDGLICDIYARQCPKPIEYHNRRDLIRIF 206
           E +  DL+KMA+KLES+ L KI F+S H+IDLD L+CD + RQCP P++Y NRRDL+ IF
Sbjct: 12  EDSFSDLIKMAKKLESDILAKINFSSAHVIDLDRLLCDTFIRQCPTPLDYDNRRDLVHIF 71

Query: 205 NVITKEIYGNGANSPVVEEFGSFVMDIFNEKSDIDLSINFSNSIEVTRQKKIETLRKFSS 26
           N +TKEIYGNG  SPVVEE+GSFVMD+F+ KSDIDLS+NF+NSIEV+RQKKI  L +F+ 
Sbjct: 72  NTMTKEIYGNGDGSPVVEEYGSFVMDMFDGKSDIDLSLNFNNSIEVSRQKKISALYRFNK 131

Query: 25  KLRSLQKK 2
           KL+S+Q K
Sbjct: 132 KLQSIQSK 139


>emb|CBI21636.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/129 (51%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
 Frame = -3

Query: 388 MEPAEKDLLKMAEKLESEKLPKIKFNSTHMIDLDGLICDIYARQCPKPIEYHNRRDLIRI 209
           ME +E  LLK A+KLES+ L +           + L+ ++   + PKPI+Y NR DLIRI
Sbjct: 1   MEKSEAVLLKKAKKLESQGLQQSIVKPERAPVFEELLHNVLHIRHPKPIDYFNRIDLIRI 60

Query: 208 FNVITKEIYGNGANSPVVEEFGSFVMDIFNEKSDIDLSINFSN-SIEVTRQKKIETLRKF 32
           FNVI+KEI+GNG +  +VE FGSF+MD+F+  SD+DLSINF N  +EV+R K+I+TLRKF
Sbjct: 61  FNVISKEIHGNGDDFTIVEGFGSFLMDMFSAGSDLDLSINFGNYEVEVSRAKRIQTLRKF 120

Query: 31  SSKLRSLQK 5
             KL++LQ+
Sbjct: 121 EKKLKALQR 129


>ref|XP_003632523.1| PREDICTED: uncharacterized protein LOC100854980 [Vitis vinifera]
          Length = 134

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = -3

Query: 388 MEPAEKDLLKMAEKLESEKLPKIKFNSTHMIDLDGLICDIYARQCPKPIEYHNRRDLIRI 209
           ME +E  LLK A+KLES+ L +           + L+ ++   + PKPI+Y NR DLIRI
Sbjct: 1   MEKSEAVLLKKAKKLESQGLQQSIVKPERAPVFEELLHNVLHIRHPKPIDYFNRIDLIRI 60

Query: 208 FNVITKEIYGNGANSPVVEEFGSFVMDIFNEKSDIDLSINFSN-SIEVTRQKKIETLRKF 32
           FNVI+KEI+GNG +  +VE FGSF+MD+F+  SD+DLSINF N  +EV+R K+I+TLRKF
Sbjct: 61  FNVISKEIHGNGDDFTIVEGFGSFLMDMFSAGSDLDLSINFGNYEVEVSRAKRIQTLRKF 120

Query: 31  SSKLRSLQ 8
             KL++LQ
Sbjct: 121 EKKLKALQ 128


>gb|EEE70274.1| hypothetical protein OsJ_30421 [Oryza sativa Japonica Group]
          Length = 553

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -3

Query: 355 AEKLESEKLPKIKFNSTHMIDLDGLICDIYARQCPKPIEYHNRRDLIRIFNVITKEIYGN 176
           AE LESE+L  +  N T +  LD L+  +Y    PKP++Y  R  L+ +FN I  +I+GN
Sbjct: 47  AECLESEELAALSVNRTLLPILDNLLLQVYTMLRPKPLDYEQRTTLVHVFNNIANQIFGN 106

Query: 175 GANSPVVEEFGSFVMDIFNEKSDIDLSINFSNSI--EVTRQKKIETLRKFSSKLRSLQK 5
               PVVE FGSF MD+F  +SD+DLS+NF+ +   +  R+KKI  +RKF+  L S Q+
Sbjct: 107 NNGFPVVEAFGSFTMDLFTPRSDLDLSVNFTANTDDQYARKKKISAIRKFTKVLYSHQR 165


>gb|EEC85097.1| hypothetical protein OsI_32469 [Oryza sativa Indica Group]
          Length = 553

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -3

Query: 355 AEKLESEKLPKIKFNSTHMIDLDGLICDIYARQCPKPIEYHNRRDLIRIFNVITKEIYGN 176
           AE LESE+L  +  N T +  LD L+  +Y    PKP++Y  R  L+ +FN I  +I+GN
Sbjct: 47  AECLESEELAALSVNRTLLPILDNLLLQVYTMLRPKPLDYEQRTTLVHVFNNIANQIFGN 106

Query: 175 GANSPVVEEFGSFVMDIFNEKSDIDLSINFSNSI--EVTRQKKIETLRKFSSKLRSLQK 5
               PVVE FGSF MD+F  +SD+DLS+NF+ +   +  R+KKI  +RKF+  L S Q+
Sbjct: 107 NNGFPVVEAFGSFTMDLFTPRSDLDLSVNFTANTDDQYARKKKISAIRKFAKVLYSHQR 165


Top