BLASTX nr result

ID: Glycyrrhiza24_contig00020444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020444
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   479   e-133
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   476   e-132
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   470   e-130
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   459   e-127
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126

>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1214

 Score =  479 bits (1233), Expect = e-133
 Identities = 240/269 (89%), Positives = 249/269 (92%)
 Frame = +2

Query: 2    TQIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGAVLVFM 181
            +QIASAVEDALE+ADFKGYSL T+ES+S W PDSIGFNLIEHVLCHIVKNERPGA LVFM
Sbjct: 543  SQIASAVEDALEVADFKGYSLRTKESMSCWNPDSIGFNLIEHVLCHIVKNERPGAALVFM 602

Query: 182  TGWDDINSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPKGGVRKIVLATNMA 361
            TGWDDINSLKD+L AHPLLGDQSRVLLLACHGSM+SSEQ+LIFENP GGVRKIVLATNMA
Sbjct: 603  TGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMA 662

Query: 362  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQSGECYHL 541
            ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISK            VQSGECYHL
Sbjct: 663  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHL 722

Query: 542  YPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQLGSISEFLSSALQSPEPLSVQNAVEYL 721
            YPRCVYDAFADYQ+PELLRTPLQSLCLQIKSLQLGSISEFLSSALQ PEPLSVQNAV+YL
Sbjct: 723  YPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSSALQPPEPLSVQNAVDYL 782

Query: 722  KIIGALDENENLTVLGRKLSMLPVEPKLG 808
            KIIGALDENENLTVLG KLSMLPVEPKLG
Sbjct: 783  KIIGALDENENLTVLGCKLSMLPVEPKLG 811


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1177

 Score =  476 bits (1226), Expect = e-132
 Identities = 236/269 (87%), Positives = 248/269 (92%)
 Frame = +2

Query: 2    TQIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGAVLVFM 181
            +QIASAVEDALE+A+FKGYSL TR+SLS WCPDSIGFNLIEHVLCHIVKNERPGAVLVFM
Sbjct: 507  SQIASAVEDALEVAEFKGYSLRTRDSLSCWCPDSIGFNLIEHVLCHIVKNERPGAVLVFM 566

Query: 182  TGWDDINSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPKGGVRKIVLATNMA 361
            TGWDDINSLKDQLQ HPLLGD S+VL+LACHGSMASSEQRLIFENP+GGVRKIVLATNMA
Sbjct: 567  TGWDDINSLKDQLQVHPLLGDHSQVLILACHGSMASSEQRLIFENPEGGVRKIVLATNMA 626

Query: 362  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQSGECYHL 541
            ETSITINDVVFVVD GKAKETSYDALNNTPCLLPSWISK            VQ GECYHL
Sbjct: 627  ETSITINDVVFVVDIGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHL 686

Query: 542  YPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQLGSISEFLSSALQSPEPLSVQNAVEYL 721
            YPRCVYDAFADYQ+PELLRTPLQSLCLQIK+LQLGSISEFLS ALQ PEPLSVQNA++YL
Sbjct: 687  YPRCVYDAFADYQLPELLRTPLQSLCLQIKTLQLGSISEFLSRALQPPEPLSVQNAIDYL 746

Query: 722  KIIGALDENENLTVLGRKLSMLPVEPKLG 808
            KIIGALDENENLTVLG KL+MLPVEPKLG
Sbjct: 747  KIIGALDENENLTVLGHKLAMLPVEPKLG 775


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1180

 Score =  470 bits (1210), Expect = e-130
 Identities = 236/269 (87%), Positives = 246/269 (91%)
 Frame = +2

Query: 2    TQIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGAVLVFM 181
            + IASAVEDALE+A+FKGYSL T++SLS W PDSIGFNLIEHVLCHIVKNER GAVLVFM
Sbjct: 510  SHIASAVEDALEVAEFKGYSLRTQDSLSCWYPDSIGFNLIEHVLCHIVKNERSGAVLVFM 569

Query: 182  TGWDDINSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPKGGVRKIVLATNMA 361
            TGWDDI SLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENP+GGVRKIVLATNMA
Sbjct: 570  TGWDDITSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPEGGVRKIVLATNMA 629

Query: 362  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQSGECYHL 541
            ETSITINDVVFVVD GKAKETSYDALNNTPCLLPSWISK            VQ GECYHL
Sbjct: 630  ETSITINDVVFVVDIGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHL 689

Query: 542  YPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQLGSISEFLSSALQSPEPLSVQNAVEYL 721
            YPRCVYDAFADYQ+PELLRTPLQSLCLQIK+LQLGSISEFLS ALQ PEPLSVQNA+EYL
Sbjct: 690  YPRCVYDAFADYQLPELLRTPLQSLCLQIKTLQLGSISEFLSRALQPPEPLSVQNAIEYL 749

Query: 722  KIIGALDENENLTVLGRKLSMLPVEPKLG 808
            KIIGALDENENLTVLG KL+MLPVEPKLG
Sbjct: 750  KIIGALDENENLTVLGHKLAMLPVEPKLG 778


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1058

 Score =  459 bits (1180), Expect = e-127
 Identities = 230/269 (85%), Positives = 240/269 (89%)
 Frame = +2

Query: 2    TQIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGAVLVFM 181
            TQIASAVEDALE A+FKGYSL T+ESLSSW PDSIGFNLIE VLCHIVK ERPGAVLVFM
Sbjct: 427  TQIASAVEDALEAANFKGYSLRTQESLSSWNPDSIGFNLIERVLCHIVKKERPGAVLVFM 486

Query: 182  TGWDDINSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPKGGVRKIVLATNMA 361
            TGWDDI+SLKDQLQ HP+LGD SR+LLLACHGSM SSEQRLIF+ PK GV KIVLATNMA
Sbjct: 487  TGWDDISSLKDQLQTHPVLGDPSRILLLACHGSMDSSEQRLIFDKPKDGVHKIVLATNMA 546

Query: 362  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQSGECYHL 541
            ETSITI D VFVVDCGKAKETSYDALNNTPCLLPSWISK            VQ GECYHL
Sbjct: 547  ETSITIPDAVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHL 606

Query: 542  YPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQLGSISEFLSSALQSPEPLSVQNAVEYL 721
            YPRCVYDAFADYQ+PELLRTPLQSLCLQIKSLQLGSISEFLS ALQ PEPLSVQNA+EYL
Sbjct: 607  YPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSRALQPPEPLSVQNAIEYL 666

Query: 722  KIIGALDENENLTVLGRKLSMLPVEPKLG 808
            K+IGALDENENLT+LGR LSMLPVEPKLG
Sbjct: 667  KVIGALDENENLTLLGRHLSMLPVEPKLG 695


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
            predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  456 bits (1173), Expect = e-126
 Identities = 231/269 (85%), Positives = 241/269 (89%)
 Frame = +2

Query: 2    TQIASAVEDALELADFKGYSLHTRESLSSWCPDSIGFNLIEHVLCHIVKNERPGAVLVFM 181
            +QIAS+VEDALE+ADFKG S  T ESLS W PDSIGFNLIEHVLCHIVK ERPGAVLVFM
Sbjct: 390  SQIASSVEDALEVADFKGCSSRTWESLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFM 449

Query: 182  TGWDDINSLKDQLQAHPLLGDQSRVLLLACHGSMASSEQRLIFENPKGGVRKIVLATNMA 361
            TGWDDINSLKDQLQAHP+LGD  RVLLLACHGSMASSEQRLIF+ P+ GVRKIVLATNMA
Sbjct: 450  TGWDDINSLKDQLQAHPILGDPCRVLLLACHGSMASSEQRLIFDKPEDGVRKIVLATNMA 509

Query: 362  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKXXXXXXXXXXXXVQSGECYHL 541
            ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISK            VQ GECYHL
Sbjct: 510  ETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRKGRAGRVQPGECYHL 569

Query: 542  YPRCVYDAFADYQMPELLRTPLQSLCLQIKSLQLGSISEFLSSALQSPEPLSVQNAVEYL 721
            YPRCVYDAFADYQ+PELLRTPLQSL LQIKSLQLGSISEFLS ALQ PEPLSVQNAVEYL
Sbjct: 570  YPRCVYDAFADYQLPELLRTPLQSLSLQIKSLQLGSISEFLSRALQPPEPLSVQNAVEYL 629

Query: 722  KIIGALDENENLTVLGRKLSMLPVEPKLG 808
            K+IGALDE+ENLTVLGR LS+LPVEPKLG
Sbjct: 630  KLIGALDEHENLTVLGRHLSVLPVEPKLG 658


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