BLASTX nr result

ID: Glycyrrhiza24_contig00020443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020443
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1...   334   5e-90
ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1...   330   7e-89
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   320   1e-85
ref|XP_002526002.1| protein with unknown function [Ricinus commu...   303   2e-80
ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   301   6e-80

>ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1486

 Score =  334 bits (857), Expect = 5e-90
 Identities = 163/185 (88%), Positives = 168/185 (90%)
 Frame = +1

Query: 1   SDPFAEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELLYSTGSGWHKRCR 180
           SDPFAEV+LQPLP++TIPSDGVTMTCVACTDKGRIFLAGRDGHIYE+LYSTGSGW KRCR
Sbjct: 167 SDPFAEVTLQPLPEHTIPSDGVTMTCVACTDKGRIFLAGRDGHIYEILYSTGSGWQKRCR 226

Query: 181 KICITAGLGSVISRWVVPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGG 360
           KICITAGLGSVISRWV+PNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNG 
Sbjct: 227 KICITAGLGSVISRWVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGD 286

Query: 361 GQLKKVAEERNLVNQRDAHYXXXXXXXXXXXXXXPKPSIVCISPLSTLESKWLHLVAVLS 540
           G LKKVAEERNLVNQRDAHY              PKPSIVCISPLSTLESKWLHLVAVLS
Sbjct: 287 GPLKKVAEERNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLS 346

Query: 541 DGRRM 555
           DGRRM
Sbjct: 347 DGRRM 351


>ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1485

 Score =  330 bits (847), Expect = 7e-89
 Identities = 161/185 (87%), Positives = 168/185 (90%)
 Frame = +1

Query: 1   SDPFAEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELLYSTGSGWHKRCR 180
           SDPFAEV+LQPLP++TIPSDGVTMTCVACT+KGRIFLAGRDGHIYE+LYSTGSGW KRCR
Sbjct: 167 SDPFAEVTLQPLPEHTIPSDGVTMTCVACTNKGRIFLAGRDGHIYEILYSTGSGWQKRCR 226

Query: 181 KICITAGLGSVISRWVVPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGG 360
           KICITAGLGSVISRWV+PNVF+FGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNG 
Sbjct: 227 KICITAGLGSVISRWVIPNVFSFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGD 286

Query: 361 GQLKKVAEERNLVNQRDAHYXXXXXXXXXXXXXXPKPSIVCISPLSTLESKWLHLVAVLS 540
           G LKKVAEERNLVNQRDAHY              PKPSIVCISPLSTLESKWLHLVAVLS
Sbjct: 287 GPLKKVAEERNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLS 346

Query: 541 DGRRM 555
           DGRRM
Sbjct: 347 DGRRM 351


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
           gi|355524966|gb|AET05420.1| Nuclear pore complex protein
           Nup155 [Medicago truncatula]
          Length = 1484

 Score =  320 bits (819), Expect = 1e-85
 Identities = 156/185 (84%), Positives = 164/185 (88%)
 Frame = +1

Query: 1   SDPFAEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELLYSTGSGWHKRCR 180
           SDPFAEVSLQPLPDYTIPSDGVTMT VACTDKGRIFLAGRDGHIYEL+YSTGSGW KRCR
Sbjct: 167 SDPFAEVSLQPLPDYTIPSDGVTMTSVACTDKGRIFLAGRDGHIYELIYSTGSGWQKRCR 226

Query: 181 KICITAGLGSVISRWVVPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGG 360
           K+C+TAGLGSVISRWV+PNVFNFGAVDP+VEMVFDNERQILYARTEEMKLQVYVLGP G 
Sbjct: 227 KVCVTAGLGSVISRWVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGD 286

Query: 361 GQLKKVAEERNLVNQRDAHYXXXXXXXXXXXXXXPKPSIVCISPLSTLESKWLHLVAVLS 540
           G LKK+AEERNLVN +DAH+              PKPSIVCISPLSTLESK LHLVAVLS
Sbjct: 287 GPLKKIAEERNLVNHKDAHHGGRQSSGSRVSSRSPKPSIVCISPLSTLESKSLHLVAVLS 346

Query: 541 DGRRM 555
           DGRRM
Sbjct: 347 DGRRM 351


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
           gi|223534734|gb|EEF36426.1| protein with unknown
           function [Ricinus communis]
          Length = 1490

 Score =  303 bits (775), Expect = 2e-80
 Identities = 144/185 (77%), Positives = 159/185 (85%)
 Frame = +1

Query: 1   SDPFAEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELLYSTGSGWHKRCR 180
           +DP+AE+SLQ LP+YT+PSDGVTMTCVACTD GRIFLAGRDGH+YEL Y+TGSGWHKRCR
Sbjct: 167 TDPYAEISLQALPEYTVPSDGVTMTCVACTDMGRIFLAGRDGHVYELQYTTGSGWHKRCR 226

Query: 181 KICITAGLGSVISRWVVPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGG 360
           K+C+T+GLGSVISRWVVPNVF FGAVDPI+EMVFDNERQILYARTEE KLQV++LGP+G 
Sbjct: 227 KVCLTSGLGSVISRWVVPNVFKFGAVDPIIEMVFDNERQILYARTEETKLQVFLLGPDGE 286

Query: 361 GQLKKVAEERNLVNQRDAHYXXXXXXXXXXXXXXPKPSIVCISPLSTLESKWLHLVAVLS 540
           G LKKVAEERNL + RD HY               KPSIV ISPLSTLESKWLHLVAVLS
Sbjct: 287 GPLKKVAEERNLFSHRDVHYGGRQSTGPRTPSRSAKPSIVSISPLSTLESKWLHLVAVLS 346

Query: 541 DGRRM 555
           DGRRM
Sbjct: 347 DGRRM 351


>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis
           vinifera]
          Length = 1496

 Score =  301 bits (770), Expect = 6e-80
 Identities = 143/185 (77%), Positives = 158/185 (85%)
 Frame = +1

Query: 1   SDPFAEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELLYSTGSGWHKRCR 180
           +DP+ EVSLQ LP+YTIPSDGVTMTC+ CTDKGRIFLAGRDGHIYE+ Y+TGSGW+KRCR
Sbjct: 167 TDPYEEVSLQLLPEYTIPSDGVTMTCITCTDKGRIFLAGRDGHIYEMHYTTGSGWNKRCR 226

Query: 181 KICITAGLGSVISRWVVPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGG 360
           K+C+T GLGSVISRW+VP VF FGAVDPIVEMV DNER ILYARTEEMKLQV+VLGP G 
Sbjct: 227 KVCLTVGLGSVISRWIVPTVFKFGAVDPIVEMVVDNERHILYARTEEMKLQVFVLGPKGD 286

Query: 361 GQLKKVAEERNLVNQRDAHYXXXXXXXXXXXXXXPKPSIVCISPLSTLESKWLHLVAVLS 540
           G LKKVAEER+L+NQ+DAHY               KPSI+CISPLSTLESKWLHLVAVLS
Sbjct: 287 GPLKKVAEERSLINQKDAHYGGRQSAGSRPSNRSVKPSIICISPLSTLESKWLHLVAVLS 346

Query: 541 DGRRM 555
           DGRRM
Sbjct: 347 DGRRM 351


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