BLASTX nr result

ID: Glycyrrhiza24_contig00020442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020442
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   301   8e-80
ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   171   1e-40
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   150   2e-34
gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]             128   1e-27
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   128   1e-27

>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  301 bits (771), Expect = 8e-80
 Identities = 154/213 (72%), Positives = 172/213 (80%), Gaps = 8/213 (3%)
 Frame = -3

Query: 615 FYALICPNSPFV*DGKGFSECFED-------IFLGFAVNIVTIVMTVVLGFNQKI-GRGV 460
           F+ALICPNSP V   K     +E         F GFAVN+VTI M +VLG  QKI GRG 
Sbjct: 9   FFALICPNSPSV-PFKIIKVLYEFHISLVLVYFTGFAVNVVTIAMILVLGIKQKISGRGT 67

Query: 459 QRSDAQITLPEKFVLGFVPAVGACLSILDVIFLWKKEHDGHFVGYHKWFHSYSELLVWAN 280
           QRSDAQ++L EKFVL FVPA+GAC S+L+++FL KKEHDGHFVGYH+W HS SELLVWAN
Sbjct: 68  QRSDAQMSLLEKFVLYFVPAIGACCSVLEIMFLLKKEHDGHFVGYHRWLHSCSELLVWAN 127

Query: 279 IILFTKCASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSLEVSVRIMESLVVLLDISFG 100
           IILFTKCAS HCIVFNRVLCFWWIL P LG+FHLIT FPSLEVS  IMESLVVL+++SFG
Sbjct: 128 IILFTKCASIHCIVFNRVLCFWWILNPILGIFHLITNFPSLEVSACIMESLVVLMNLSFG 187

Query: 99  IAINVIRIKRLPPKSSLLEDSLLSNGGDLEEGG 1
           + INVIR+KRL  KSSLLED LLSNGGDLEEGG
Sbjct: 188 VVINVIRLKRLSSKSSLLEDPLLSNGGDLEEGG 220


>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  171 bits (434), Expect = 1e-40
 Identities = 97/168 (57%), Positives = 109/168 (64%)
 Frame = -3

Query: 504 MTVVLGFNQKIGRGVQRSDAQITLPEKFVLGFVPAVGACLSILDVIFLWKKEHDGHFVGY 325
           M VVLGFNQKIGRG + SD+Q+TLPEKFVL  +PAVGACLSI+D+IFLWKK+H+ HFVGY
Sbjct: 1   MIVVLGFNQKIGRGFRLSDSQMTLPEKFVLNLIPAVGACLSIVDLIFLWKKDHNSHFVGY 60

Query: 324 HKWFHSYSELLVWANIILFTKCASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSLEVSV 145
           HKWF+S SEL++W                                            VSV
Sbjct: 61  HKWFNSCSELILW--------------------------------------------VSV 76

Query: 144 RIMESLVVLLDISFGIAINVIRIKRLPPKSSLLEDSLLSNGGDLEEGG 1
            IMESLVVLL+ISF IAINVIRIK    KSSLLED LLSNG DLEEGG
Sbjct: 77  CIMESLVVLLNISFSIAINVIRIKIPSFKSSLLEDPLLSNGVDLEEGG 124


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  150 bits (379), Expect = 2e-34
 Identities = 74/146 (50%), Positives = 98/146 (67%)
 Frame = -3

Query: 441 ITLPEKFVLGFVPAVGACLSILDVIFLWKKEHDGHFVGYHKWFHSYSELLVWANIILFTK 262
           I+  EK V  F+P +GA +S +D+I L  KE  G+F+ YH+W    S+L+VW  II+ + 
Sbjct: 5   ISCTEKTVFRFLPFLGALVSFMDLILLVNKELHGNFIAYHEWLFRSSQLIVWTVIIISSM 64

Query: 261 CASSHCIVFNRVLCFWWILKPTLGVFHLITKFPSLEVSVRIMESLVVLLDISFGIAINVI 82
           CA  H +  NR LCFWWI+K  LG+ HL   F S+EV   + +S VVLLD+ FGI+IN+I
Sbjct: 65  CACLHDVFCNRFLCFWWIMKSLLGILHLHRAFGSMEVVKCLKDSCVVLLDVMFGISINII 124

Query: 81  RIKRLPPKSSLLEDSLLSNGGDLEEG 4
           RIKR  PKSS +ED LLS   D+EEG
Sbjct: 125 RIKRASPKSSSMEDPLLSVDTDIEEG 150


>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score =  128 bits (322), Expect = 1e-27
 Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
 Frame = -3

Query: 603 ICPNSPFV*DGKGFSECFEDIFLGFAVNIVTIVMTVVLGFNQKIGRGVQRSDAQITLPEK 424
           ICP+SP+V +G G S CF +I LGF  N+ T+++ V++G  ++ GR  +R    I L  K
Sbjct: 7   ICPDSPYVWNGNGVSRCFSNIVLGFGANMATLIVIVLVGVTRRSGRRSRR----IHLSAK 62

Query: 423 FVLGFVPAVGACLSILDVIFLWKKEHDGHFVGYHKWFHSYSELLVWANIILFTKCASSHC 244
            +L  VPA+GA +S  +++ L +K   G+   + ++    S   VW  ++L + C     
Sbjct: 63  ILLFTVPALGAFVSFFEIVVLLRKIVGGYPFAFQEYLFPGSLFGVWVTVLLVSICDYWFV 122

Query: 243 IVFNRVLCFWWILKPTLGVFHLITKFPSLEVSVRIMESLVVLLDISFGIAINVIRIKRLP 64
           I  NR+LC WWI+KP L + HL   F S E+   + ES +  LD +FGI IN+I+ K   
Sbjct: 123 IFCNRLLCLWWIIKPFLWIPHLQVVFTSQELLPCLGESFLAFLDFTFGILINIIKSKWAS 182

Query: 63  PKSSL--LEDSLL 31
            +SS   +E+ LL
Sbjct: 183 HRSSCDSIEEPLL 195


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  128 bits (322), Expect = 1e-27
 Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
 Frame = -3

Query: 603 ICPNSPFV*DGKGFSECFEDIFLGFAVNIVTIVMTVVLGFNQKIGRGVQRSDAQITLPEK 424
           ICP+SP+V +G G S CF +I LGF  N+ T+++ V++G  ++ GR  +R    I L  K
Sbjct: 7   ICPDSPYVWNGNGVSRCFSNIVLGFGANMATLIVIVLVGVTRRSGRRSRR----IHLSAK 62

Query: 423 FVLGFVPAVGACLSILDVIFLWKKEHDGHFVGYHKWFHSYSELLVWANIILFTKCASSHC 244
            +L  VPA+GA +S  +++ L +K   G+   + ++    S   VW  ++L + C     
Sbjct: 63  ILLFTVPALGAFVSFFEIVVLLRKIVGGYPFAFQEYLFPGSLFGVWVTVLLVSICDYWFV 122

Query: 243 IVFNRVLCFWWILKPTLGVFHLITKFPSLEVSVRIMESLVVLLDISFGIAINVIRIKRLP 64
           I  NR+LC WWI+KP L + HL   F S E+   + ES +  LD +FGI IN+I+ K   
Sbjct: 123 IFCNRLLCLWWIIKPFLWIPHLQVVFTSQELLPCLGESFLAFLDFTFGILINIIKSKWAS 182

Query: 63  PKSSL--LEDSLL 31
            +SS   +E+ LL
Sbjct: 183 HRSSCDSIEEPLL 195


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