BLASTX nr result

ID: Glycyrrhiza24_contig00020422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020422
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-43
ref|XP_003550541.1| PREDICTED: RING-H2 finger protein ATL2-like ...   173   8e-41
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   172   1e-40
ref|XP_003528631.1| PREDICTED: RING-H2 finger protein ATL2-like ...   171   3e-40
gb|ACU20114.1| unknown [Glycine max]                                  170   5e-40

>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  181 bits (458), Expect = 4e-43
 Identities = 111/274 (40%), Positives = 137/274 (50%), Gaps = 20/274 (7%)
 Frame = +1

Query: 103 YALAGKXXXXXXXXXXXXXXXXXCLHVHVRMYLXXXXXXXXXXXXXVPGPQFIFYV---- 270
           +AL+GK                 CLH + R YL                   +FYV    
Sbjct: 1   FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRRN-HLVFYVDSAH 59

Query: 271 NPATLTGSATRGLDAAVISSLPVFNFSPKTHPNTVLECSVCLSEFENGETGRVLPKCNHS 450
           NP  +T   TRGL+  V+ SLPVF +S KTH ++ +EC+VCLSEF+  ETGR LPKCNHS
Sbjct: 60  NPTIVTTQVTRGLEETVLKSLPVFVYSEKTHQDS-MECAVCLSEFQENETGRTLPKCNHS 118

Query: 451 FHIGCIDRWLRSHTACPLCRAPVEPTQAQETRPEVTVDLCGPDPGSSSGL------NRXX 612
           FHIGCID W  SH+ CPLCR+PVEP      +      +  P  GSSSG       +R  
Sbjct: 119 FHIGCIDMWFHSHSTCPLCRSPVEPVTENPVQDGPGYGISVPGSGSSSGTMCQHEEDRVG 178

Query: 613 XXXXXXXXXXXXXXXLVGVTVEVPSRNGG-------ESSCDSSSFRSPMSRVLSFTRILS 771
                          L+GVT+EVP RNG        ES   S +FRSPMSR+LSF R+LS
Sbjct: 179 SASTSSFNDRRKQMELIGVTIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSFKRMLS 238

Query: 772 RERK---AXXXXXXXXXXXXXXXTELDAERGGRE 864
           RER+   +               TE+D ERG  E
Sbjct: 239 RERRGTASPNVATSVSCGGESGTTEMDVERGQDE 272


>ref|XP_003550541.1| PREDICTED: RING-H2 finger protein ATL2-like [Glycine max]
          Length = 245

 Score =  173 bits (438), Expect = 8e-41
 Identities = 102/229 (44%), Positives = 125/229 (54%), Gaps = 1/229 (0%)
 Frame = +1

Query: 100 DYALAGKXXXXXXXXXXXXXXXXXCLHVHVRMYLXXXXXXXXXXXXXVPGPQFIFYVNPA 279
           DYA +GK                 CLHV+VR  L                PQF+FY++PA
Sbjct: 7   DYAFSGKIMLIAIVVLFIVIIIMLCLHVYVRRRLVNARRRPQLRRSN--RPQFVFYMDPA 64

Query: 280 TLTGSATRGLDAAVISSLPVFNFSPKTHPNTVLECSVCLSEFENGETGRVLPKCNHSFHI 459
                  RGL  +VIS+LP+F FS   +P    EC+VCLSEFENGETGRVLPKCNHSFH 
Sbjct: 65  ARIALTRRGLHPSVISTLPMFTFSATNNPT---ECAVCLSEFENGETGRVLPKCNHSFHT 121

Query: 460 GCIDRWLRSHTACPLCRAPVEPTQAQETRPEVTVDLCGPDPGSSSGLNRXXXXXXXXXXX 639
            CID W +SH  CPLCR PVE    +ETR EV V +C  +P     +NR           
Sbjct: 122 ECIDMWFQSHATCPLCREPVEAIPERETRSEVAVIVCDNEPVREE-VNRSGPVGASSSPS 180

Query: 640 XXXXXXLVGVTVEVPSRNGGESSCDS-SSFRSPMSRVLSFTRILSRERK 783
                     ++ + S  G ES C+S SSFR P+SR+LSF R+LSRE+K
Sbjct: 181 --------AASLHIESL-GCESGCESGSSFRLPVSRILSFKRVLSREKK 220


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
           gi|223544045|gb|EEF45571.1| ring finger protein,
           putative [Ricinus communis]
          Length = 292

 Score =  172 bits (437), Expect = 1e-40
 Identities = 107/251 (42%), Positives = 134/251 (53%), Gaps = 15/251 (5%)
 Frame = +1

Query: 76  DNDRGSEHDYALAGKXXXXXXXXXXXXXXXXXCLHVHVRMYLXXXXXXXXXXXXXVPGPQ 255
           DN+  +   YAL+GK                 CLH++ R YL                  
Sbjct: 9   DNEYSTTKGYALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNRRA-H 67

Query: 256 FIFYVNPATLTGSA--TRGLDAAVISSLPVFNFSPKTHPNTVLECSVCLSEFENGETGRV 429
            IFYV+P+        +RGLDAAV+++LPVF +S KTHP+ + EC+VCLSEFE  E GR 
Sbjct: 68  LIFYVDPSNANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPI-ECAVCLSEFEENERGRT 126

Query: 430 LPKCNHSFHIGCIDRWLRSHTACPLCRAPVEPTQAQETRPEVTVDLCGPDPGSSSGL--- 600
           LPKCNHSFHI CID W  SH+ CPLCR+ VEP      R    ++    + GS +GL   
Sbjct: 127 LPKCNHSFHIECIDMWFHSHSTCPLCRSAVEPVPEDSVRVNSEIN----ETGSRAGLCVT 182

Query: 601 -----NR-XXXXXXXXXXXXXXXXXLVGVTVEVPSRNG---GESSCDS-SSFRSPMSRVL 750
                NR                   VGVT+EVP RNG    E + +S SS+RSPMSR+L
Sbjct: 183 CQHEENRVDGVASTSSFNGRRKPAEFVGVTIEVPRRNGVFEDEPATESPSSYRSPMSRML 242

Query: 751 SFTRILSRERK 783
           SF RILSRER+
Sbjct: 243 SFRRILSRERR 253


>ref|XP_003528631.1| PREDICTED: RING-H2 finger protein ATL2-like [Glycine max]
          Length = 245

 Score =  171 bits (433), Expect = 3e-40
 Identities = 109/260 (41%), Positives = 132/260 (50%), Gaps = 7/260 (2%)
 Frame = +1

Query: 100 DYALAGKXXXXXXXXXXXXXXXXXCLHVHVRMYLXXXXXXXXXXXXXVPGPQFIFYVNPA 279
           DYA +GK                 CLHV+VR  L                P+F+FY++PA
Sbjct: 7   DYAFSGKIMLIAIVVLFIVIVIMLCLHVYVRWRLVNARRRQHLRRSN--RPRFVFYMDPA 64

Query: 280 TLTGSATRGLDAAVISSLPVFNFSPKTHPNTVLECSVCLSEFENGETGRVLPKCNHSFHI 459
                  RGL  +VIS+LPVF FS   +P    EC+VCLSEFENGETGRVLPKCNHSFH 
Sbjct: 65  ARIALTRRGLHPSVISTLPVFTFSAANNPT---ECAVCLSEFENGETGRVLPKCNHSFHT 121

Query: 460 GCIDRWLRSHTACPLCRAPVEPTQAQETRPEVTVDLCGPDPGSSSGLNRXXXXXXXXXXX 639
            CID W +SH  CPLCR  VE    +ETR EV V +C  +P     +NR           
Sbjct: 122 ECIDVWFQSHATCPLCRETVEAMPERETRSEVAVIVCETEPVREE-VNRSGP-------- 172

Query: 640 XXXXXXLVGVTVEVPSRN------GGESSCDS-SSFRSPMSRVLSFTRILSRERKAXXXX 798
                  VG +    + +      G E  C+S SSFRSP+SR+LSF RILSRE+K     
Sbjct: 173 -------VGASSSAAATSLHIENLGCEDGCESESSFRSPVSRILSFKRILSREKKG---- 221

Query: 799 XXXXXXXXXXXTELDAERGG 858
                      TELD E+ G
Sbjct: 222 --SVVGVCSSMTELDVEQRG 239


>gb|ACU20114.1| unknown [Glycine max]
          Length = 264

 Score =  170 bits (431), Expect = 5e-40
 Identities = 108/232 (46%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
 Frame = +1

Query: 103 YALAGKXXXXXXXXXXXXXXXXXCLHVHVRMYLXXXXXXXXXXXXXVPGPQFIFYVNPAT 282
           Y+L+GK                 CLH++ R YL             +   Q +FY + AT
Sbjct: 30  YSLSGKIMLSAIILLFFVVVLMLCLHIYARWYLRRARRRQLRRQRELRRTQLVFYNDDAT 89

Query: 283 LTGSATRGLDAAVISSLPVFNFSP-KTHPNTVLECSVCLSEFENGETGRVLPKCNHSFHI 459
              + +RGLDAA++++LPVF F P KT P    EC+VCLSEFE GETGRVLPKCNHSFHI
Sbjct: 90  -PAAVSRGLDAAILATLPVFTFDPEKTGP----ECAVCLSEFEPGETGRVLPKCNHSFHI 144

Query: 460 GCIDRWLRSHTACPLCRAPVEPTQAQETRPEVTVDLCGPDP----GSSSGLNR-XXXXXX 624
            CID W  SH  CPLCRAPVE    +   PEV V +  PDP    GS    NR       
Sbjct: 145 ECIDMWFHSHDTCPLCRAPVE----RAPEPEVVV-ITVPDPVSETGSGENENRTGSSSSS 199

Query: 625 XXXXXXXXXXXLVGVTVEVPSR-----NGGESSCD-SSSFRSPMSRVLSFTR 762
                      LVGVT++VP R     N  + SCD SSSFRSPMSR+LSFTR
Sbjct: 200 SSVGLSKPKPSLVGVTIDVPPRDENFQNELQPSCDSSSSFRSPMSRMLSFTR 251


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