BLASTX nr result

ID: Glycyrrhiza24_contig00020419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020419
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   274   6e-72
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   274   6e-72
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   259   2e-67
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              259   2e-67
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   251   6e-65

>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  274 bits (700), Expect = 6e-72
 Identities = 141/167 (84%), Positives = 145/167 (86%)
 Frame = +2

Query: 2    GLLNDAALVXXXXXXXXXXXXXXXXXXXDRSSAEVLTSSEKQVAYHTCVALRQYFRAHLL 181
            GLLNDAA V                   DRSSAEVLTSSEKQ+AYHTCVALRQYFRAHLL
Sbjct: 686  GLLNDAASVRSGVNSGALNLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLL 745

Query: 182  LLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPA 361
            +L+DSIRPNKSNRSAARNIPS+RA YKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRW A
Sbjct: 746  VLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLA 805

Query: 362  VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 502
            VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR
Sbjct: 806  VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 852


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  274 bits (700), Expect = 6e-72
 Identities = 141/167 (84%), Positives = 145/167 (86%)
 Frame = +2

Query: 2    GLLNDAALVXXXXXXXXXXXXXXXXXXXDRSSAEVLTSSEKQVAYHTCVALRQYFRAHLL 181
            GLLNDAA V                   DRSSAEVLTSSEKQ+AYHTCVALRQYFRAHLL
Sbjct: 675  GLLNDAASVRSGVNSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLL 734

Query: 182  LLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPA 361
            +L+DSIRPNKSNRSAARNIPS+RA YKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRW A
Sbjct: 735  VLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLA 794

Query: 362  VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 502
            VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR
Sbjct: 795  VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 841


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  259 bits (661), Expect = 2e-67
 Identities = 132/166 (79%), Positives = 140/166 (84%)
 Frame = +2

Query: 5    LLNDAALVXXXXXXXXXXXXXXXXXXXDRSSAEVLTSSEKQVAYHTCVALRQYFRAHLLL 184
            LL+DAA V                   DRS  EVLTSSEKQ+AYHTCVALRQYFRAHLLL
Sbjct: 822  LLHDAASVRSGVNSGGLGLSNSGSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLL 881

Query: 185  LMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPAV 364
            L+DSIRPNK+NRSAARN+PS+RAAYKPLD+SNEAMDAVFLQLQKDRKLGPAFVR RW AV
Sbjct: 882  LVDSIRPNKNNRSAARNLPSVRAAYKPLDLSNEAMDAVFLQLQKDRKLGPAFVRARWLAV 941

Query: 365  EKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 502
            +KFL SNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVP SR
Sbjct: 942  DKFLTSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPYSR 987


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  259 bits (661), Expect = 2e-67
 Identities = 132/166 (79%), Positives = 140/166 (84%)
 Frame = +2

Query: 5    LLNDAALVXXXXXXXXXXXXXXXXXXXDRSSAEVLTSSEKQVAYHTCVALRQYFRAHLLL 184
            LL+DAA V                   DRS  EVLTSSEKQ+AYHTCVALRQYFRAHLLL
Sbjct: 666  LLHDAASVRSGVNSGGLGLSNSGSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLL 725

Query: 185  LMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPAV 364
            L+DSIRPNK+NRSAARN+PS+RAAYKPLD+SNEAMDAVFLQLQKDRKLGPAFVR RW AV
Sbjct: 726  LVDSIRPNKNNRSAARNLPSVRAAYKPLDLSNEAMDAVFLQLQKDRKLGPAFVRARWLAV 785

Query: 365  EKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 502
            +KFL SNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVP SR
Sbjct: 786  DKFLTSNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPYSR 831


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
            gi|223532632|gb|EEF34418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1871

 Score =  251 bits (640), Expect = 6e-65
 Identities = 129/167 (77%), Positives = 138/167 (82%)
 Frame = +2

Query: 2    GLLNDAALVXXXXXXXXXXXXXXXXXXXDRSSAEVLTSSEKQVAYHTCVALRQYFRAHLL 181
            GLLNDAA V                   DRS  EVLTSSEKQ+AYHTCVALRQYFRAHLL
Sbjct: 713  GLLNDAAAVRSGVNSGALNLSGASALRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLL 772

Query: 182  LLMDSIRPNKSNRSAARNIPSIRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPA 361
            LL+D+IRP K+NRS ARNIPS+RAAYKPLD+SNEA+DAVFLQLQKDRKLG AFVRTR+PA
Sbjct: 773  LLLDTIRPYKNNRSVARNIPSVRAAYKPLDLSNEAVDAVFLQLQKDRKLGSAFVRTRFPA 832

Query: 362  VEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSR 502
            V+KFL  NGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLV  SR
Sbjct: 833  VDKFLLFNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVNDSR 879


Top