BLASTX nr result

ID: Glycyrrhiza24_contig00020402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020402
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638779.1| WD-40 repeat family [Medicago truncatula] gi...   506   e-141
ref|XP_003522805.1| PREDICTED: uncharacterized WD repeat-contain...   504   e-140
ref|XP_003527914.1| PREDICTED: uncharacterized WD repeat-contain...   493   e-137
emb|CBI19139.3| unnamed protein product [Vitis vinifera]              457   e-126
ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-contain...   457   e-126

>ref|XP_003638779.1| WD-40 repeat family [Medicago truncatula] gi|355504714|gb|AES85917.1|
            WD-40 repeat family [Medicago truncatula]
          Length = 457

 Score =  506 bits (1303), Expect = e-141
 Identities = 246/280 (87%), Positives = 267/280 (95%)
 Frame = +2

Query: 2    VLNVAKPIIPTLKRHGLAPPVSRVQISTMAVKENLMVAGGFHGELICKNLNHSEVAFCSK 181
            VLNVAKP+IPTLK  GLA PVSRVQISTMAVKENLMVAGGFHGEL+CKNLNHS VAFCSK
Sbjct: 178  VLNVAKPVIPTLKHCGLAHPVSRVQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSK 237

Query: 182  ITTDDTAITNAVDVYRNPSGSLRVVTANNDSQVRVFDAENFASLGCFKYDWSVNNTSISP 361
            ITTDD+AITNAVDV+RNPSGSLRV+ ANNDSQVRVFDAENFASLGCFKYDWSVNN S+SP
Sbjct: 238  ITTDDSAITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSP 297

Query: 362  DGKLLAVLGDSTECLVADANTGKVIGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLWD 541
            DGKLLAVLGDSTE L+ADANTGKV G+LKGHLDYSF+SAWHP+G+ILATGNQDTTCRLWD
Sbjct: 298  DGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWD 357

Query: 542  IRNLSQSIAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYAQGQEIDLFGEI 721
            IRNLS+SIAVLKGRMGAIR+L+FTSDG+FLAMAEPADFVHIFDSHSGY Q QEID+FGEI
Sbjct: 358  IRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEI 417

Query: 722  AGVSFSPDTEALFVGIADRTYGSLLEFTRKRHNKYLDVML 841
            AG+SFSPDTEALFVG+ADRTYGSLLEFTRK + +YLD M+
Sbjct: 418  AGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 457


>ref|XP_003522805.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like
            [Glycine max]
          Length = 447

 Score =  504 bits (1299), Expect = e-140
 Identities = 250/278 (89%), Positives = 259/278 (93%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2    VLNVAKPIIPTLKRHG-LAPPVSRVQISTMAVKENLMVAGGFHGELICKNLNHSEVAFCS 178
            VLNVAKPIIPTLKR G LA PVSRVQISTM VKENLMVAGGF GELICKNL H  V FC 
Sbjct: 168  VLNVAKPIIPTLKRPGFLAQPVSRVQISTMTVKENLMVAGGFQGELICKNLKHPGVLFCG 227

Query: 179  KITTDDTAITNAVDVYRNPSGSLRVVTANNDSQVRVFDAENFASLGCFKYDWSVNNTSIS 358
            KITTDD AITNAVDVY NP+GSLRV+TANND QVRVFDAENFASLGCFKYDWSVNNTS+S
Sbjct: 228  KITTDDNAITNAVDVYSNPAGSLRVITANNDFQVRVFDAENFASLGCFKYDWSVNNTSVS 287

Query: 359  PDGKLLAVLGDSTECLVADANTGKVIGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLW 538
            PDGKLLAVLGDSTECL+ADANTGK+ GSLKGHLDYSF+SAWHPDG+ILATGNQD TCRLW
Sbjct: 288  PDGKLLAVLGDSTECLIADANTGKITGSLKGHLDYSFSSAWHPDGQILATGNQDKTCRLW 347

Query: 539  DIRNLSQSIAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYAQGQEIDLFGE 718
            DIRNLSQS+AVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGY QGQEIDLFGE
Sbjct: 348  DIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYEQGQEIDLFGE 407

Query: 719  IAGVSFSPDTEALFVGIADRTYGSLLEFTRKRHNKYLD 832
            IAG+SFSPDTEALFVGIADRTYGSLLEF RKRH  YLD
Sbjct: 408  IAGISFSPDTEALFVGIADRTYGSLLEFNRKRHYNYLD 445


>ref|XP_003527914.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Glycine max]
          Length = 415

 Score =  493 bits (1269), Expect = e-137
 Identities = 245/278 (88%), Positives = 257/278 (92%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2   VLNVAKPIIPTLKRHG-LAPPVSRVQISTMAVKENLMVAGGFHGELICKNLNHSEVAFCS 178
           VLNVAKPIIPTL   G LA PVSRVQISTM VKENLMVAGGF GELICKNL    V FC 
Sbjct: 136 VLNVAKPIIPTLTHPGFLAQPVSRVQISTMTVKENLMVAGGFQGELICKNLKQPGVLFCG 195

Query: 179 KITTDDTAITNAVDVYRNPSGSLRVVTANNDSQVRVFDAENFASLGCFKYDWSVNNTSIS 358
           KITTD  AITNAVDVYRNP+GSLRV+TANNDSQ+RVFDAENFASLGCFKYDWSVNNTSIS
Sbjct: 196 KITTDGNAITNAVDVYRNPAGSLRVITANNDSQLRVFDAENFASLGCFKYDWSVNNTSIS 255

Query: 359 PDGKLLAVLGDSTECLVADANTGKVIGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLW 538
           PDG+LLAVLGDSTECL+ADAN+GK+ GSLKGHLDYSF+SAWHP+G+ILATGNQD TCRLW
Sbjct: 256 PDGRLLAVLGDSTECLMADANSGKITGSLKGHLDYSFSSAWHPNGQILATGNQDKTCRLW 315

Query: 539 DIRNLSQSIAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYAQGQEIDLFGE 718
           DIRNLSQS+AVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGY QGQEIDLFGE
Sbjct: 316 DIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYEQGQEIDLFGE 375

Query: 719 IAGVSFSPDTEALFVGIADRTYGSLLEFTRKRHNKYLD 832
           IAG+SFSPDTEALFVGIADRTYGSLLEF RKRH  YLD
Sbjct: 376 IAGISFSPDTEALFVGIADRTYGSLLEFNRKRHYNYLD 413


>emb|CBI19139.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  457 bits (1177), Expect = e-126
 Identities = 225/281 (80%), Positives = 251/281 (89%), Gaps = 1/281 (0%)
 Frame = +2

Query: 2    VLNVAKPIIPTLKRHG-LAPPVSRVQISTMAVKENLMVAGGFHGELICKNLNHSEVAFCS 178
            VLNVAKPI+ TLK  G L   +SRVQISTM VKENLMVAGGF GELICKNL+   VAFC+
Sbjct: 311  VLNVAKPIVSTLKCPGSLGQSLSRVQISTMTVKENLMVAGGFQGELICKNLSQPGVAFCA 370

Query: 179  KITTDDTAITNAVDVYRNPSGSLRVVTANNDSQVRVFDAENFASLGCFKYDWSVNNTSIS 358
            K+TTDD AITNAVDVY NP+GSLRV+ ANND++VR+FDAENFA L  F Y WSVNNTS+S
Sbjct: 371  KLTTDDNAITNAVDVYHNPNGSLRVMAANNDAEVRIFDAENFACLNRFTYPWSVNNTSVS 430

Query: 359  PDGKLLAVLGDSTECLVADANTGKVIGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLW 538
            PDGKLLAVLGDS ECL+ADA TGKV+ +LKGHLDYSFASAWHPDGR LATGNQDTTCRLW
Sbjct: 431  PDGKLLAVLGDSAECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDTTCRLW 490

Query: 539  DIRNLSQSIAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYAQGQEIDLFGE 718
            DIRNLS+S AVLKGRMGAIRA+RF+SDGRF+AMAEPADFVH+FD+ SGY +GQEIDLFGE
Sbjct: 491  DIRNLSESQAVLKGRMGAIRAVRFSSDGRFMAMAEPADFVHVFDTESGYVKGQEIDLFGE 550

Query: 719  IAGVSFSPDTEALFVGIADRTYGSLLEFTRKRHNKYLDVML 841
            IAG+SFSPDTEALFVGIADRTYGSLLEF R+R N+YLD ++
Sbjct: 551  IAGISFSPDTEALFVGIADRTYGSLLEFNRRRCNQYLDSII 591


>ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
            [Vitis vinifera]
          Length = 450

 Score =  457 bits (1177), Expect = e-126
 Identities = 225/281 (80%), Positives = 251/281 (89%), Gaps = 1/281 (0%)
 Frame = +2

Query: 2    VLNVAKPIIPTLKRHG-LAPPVSRVQISTMAVKENLMVAGGFHGELICKNLNHSEVAFCS 178
            VLNVAKPI+ TLK  G L   +SRVQISTM VKENLMVAGGF GELICKNL+   VAFC+
Sbjct: 170  VLNVAKPIVSTLKCPGSLGQSLSRVQISTMTVKENLMVAGGFQGELICKNLSQPGVAFCA 229

Query: 179  KITTDDTAITNAVDVYRNPSGSLRVVTANNDSQVRVFDAENFASLGCFKYDWSVNNTSIS 358
            K+TTDD AITNAVDVY NP+GSLRV+ ANND++VR+FDAENFA L  F Y WSVNNTS+S
Sbjct: 230  KLTTDDNAITNAVDVYHNPNGSLRVMAANNDAEVRIFDAENFACLNRFTYPWSVNNTSVS 289

Query: 359  PDGKLLAVLGDSTECLVADANTGKVIGSLKGHLDYSFASAWHPDGRILATGNQDTTCRLW 538
            PDGKLLAVLGDS ECL+ADA TGKV+ +LKGHLDYSFASAWHPDGR LATGNQDTTCRLW
Sbjct: 290  PDGKLLAVLGDSAECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDTTCRLW 349

Query: 539  DIRNLSQSIAVLKGRMGAIRALRFTSDGRFLAMAEPADFVHIFDSHSGYAQGQEIDLFGE 718
            DIRNLS+S AVLKGRMGAIRA+RF+SDGRF+AMAEPADFVH+FD+ SGY +GQEIDLFGE
Sbjct: 350  DIRNLSESQAVLKGRMGAIRAVRFSSDGRFMAMAEPADFVHVFDTESGYVKGQEIDLFGE 409

Query: 719  IAGVSFSPDTEALFVGIADRTYGSLLEFTRKRHNKYLDVML 841
            IAG+SFSPDTEALFVGIADRTYGSLLEF R+R N+YLD ++
Sbjct: 410  IAGISFSPDTEALFVGIADRTYGSLLEFNRRRCNQYLDSII 450


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