BLASTX nr result

ID: Glycyrrhiza24_contig00020399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020399
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609383.1| Structural maintenance of chromosomes protei...   289   1e-76
ref|XP_003556332.1| PREDICTED: structural maintenance of chromos...   286   9e-76
ref|XP_003613410.1| Structural maintenance of chromosomes protei...   285   3e-75
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   281   5e-74
ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5...   278   3e-73

>ref|XP_003609383.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355510438|gb|AES91580.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 241

 Score =  289 bits (740), Expect = 1e-76
 Identities = 142/148 (95%), Positives = 145/148 (97%)
 Frame = +2

Query: 2   VAQINETFSCNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGER 181
           VAQINETFS NFQ+MAVAGEVSLDEHDMDFDQ+GI IKVKFRENG+LE LSAHHQSGGER
Sbjct: 76  VAQINETFSQNFQQMAVAGEVSLDEHDMDFDQYGIHIKVKFRENGQLEVLSAHHQSGGER 135

Query: 182 SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 361
           SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL
Sbjct: 136 SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 195

Query: 362 LPDLQYSEACSILNVMNGPWIEQPSKVW 445
           LPDLQYSEACSILNVMNGPWIEQPSKVW
Sbjct: 196 LPDLQYSEACSILNVMNGPWIEQPSKVW 223


>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
            [Glycine max]
          Length = 1059

 Score =  286 bits (733), Expect = 9e-76
 Identities = 141/146 (96%), Positives = 144/146 (98%)
 Frame = +2

Query: 2    VAQINETFSCNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGER 181
            VA+INETFS NFQEMAVAGEVSLDE DMDFDQFGILIKVKFRENG+L+NLSAHHQSGGER
Sbjct: 887  VAKINETFSFNFQEMAVAGEVSLDERDMDFDQFGILIKVKFRENGQLQNLSAHHQSGGER 946

Query: 182  SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 361
            SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL
Sbjct: 947  SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 1006

Query: 362  LPDLQYSEACSILNVMNGPWIEQPSK 439
            LPDLQYSEACSILNVMNGPWIEQPSK
Sbjct: 1007 LPDLQYSEACSILNVMNGPWIEQPSK 1032


>ref|XP_003613410.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355514745|gb|AES96368.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 264

 Score =  285 bits (729), Expect = 3e-75
 Identities = 138/148 (93%), Positives = 145/148 (97%)
 Frame = +2

Query: 2   VAQINETFSCNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGER 181
           VAQINETF+ NFQ+MAVAGEVSLDEHDMDFDQFGIL+KVKFRENG+L+ LSAHHQSGGER
Sbjct: 99  VAQINETFNRNFQQMAVAGEVSLDEHDMDFDQFGILVKVKFRENGQLKVLSAHHQSGGER 158

Query: 182 SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 361
           SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKP+TPQCFLLTPKL
Sbjct: 159 SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPSTPQCFLLTPKL 218

Query: 362 LPDLQYSEACSILNVMNGPWIEQPSKVW 445
           LPDLQYSEACSILNVMNGPWIE+PSK W
Sbjct: 219 LPDLQYSEACSILNVMNGPWIEKPSKAW 246


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
            vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
            product [Vitis vinifera]
          Length = 1051

 Score =  281 bits (718), Expect = 5e-74
 Identities = 135/148 (91%), Positives = 145/148 (97%)
 Frame = +2

Query: 2    VAQINETFSCNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGER 181
            VAQINETFS NFQ+MAVAGEVSLDEHD+DFDQFGILIKVKFR+ G+L+ LSAHHQSGGER
Sbjct: 886  VAQINETFSRNFQDMAVAGEVSLDEHDIDFDQFGILIKVKFRQAGELQVLSAHHQSGGER 945

Query: 182  SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 361
            SV+TI+YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS+PNTPQCFLLTPKL
Sbjct: 946  SVATILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKL 1005

Query: 362  LPDLQYSEACSILNVMNGPWIEQPSKVW 445
            LPDL+YSEACSILN+MNGPWIEQPSKVW
Sbjct: 1006 LPDLEYSEACSILNIMNGPWIEQPSKVW 1033


>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
            communis] gi|223543042|gb|EEF44577.1| structural
            maintenance of chromosomes 5 smc5, putative [Ricinus
            communis]
          Length = 1057

 Score =  278 bits (711), Expect = 3e-73
 Identities = 133/148 (89%), Positives = 144/148 (97%)
 Frame = +2

Query: 2    VAQINETFSCNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGER 181
            VA+INETFS NFQEMAVAGEVSLDEHD DFDQ+GILIKVKFR+ G+L+ LSAHHQSGGER
Sbjct: 894  VARINETFSRNFQEMAVAGEVSLDEHDKDFDQYGILIKVKFRQAGQLQVLSAHHQSGGER 953

Query: 182  SVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKL 361
            SVST++YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS+PNTPQCFLLTPKL
Sbjct: 954  SVSTVLYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKL 1013

Query: 362  LPDLQYSEACSILNVMNGPWIEQPSKVW 445
            LPDL+YSEACSILN+MNGPWIEQP+KVW
Sbjct: 1014 LPDLEYSEACSILNIMNGPWIEQPAKVW 1041


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