BLASTX nr result
ID: Glycyrrhiza24_contig00020376
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00020376 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h... 160 1e-37 ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica... 125 4e-27 ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica... 125 5e-27 ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 103 2e-20 ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 >ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago truncatula] Length = 1331 Score = 160 bits (404), Expect = 1e-37 Identities = 78/100 (78%), Positives = 91/100 (91%) Frame = -3 Query: 301 DISLEKQPDEIISSSPTSCSIDEIKSTASKDGKDENCITNFNELSNIPNVSSRRPLTAPT 122 D+S +KQPDEI SSSPTS SID+IKST SKD K+EN TNFNELSN+P+VS++RPLT PT Sbjct: 196 DVSTDKQPDEIRSSSPTSRSIDDIKSTNSKDRKNENPTTNFNELSNLPHVSTQRPLTTPT 255 Query: 121 IVHVYRPPEVEEKRKDLPIVMMEQEIMEAINDHSNVIICG 2 +VHVYRPPEV+EKRKDLPIVMMEQEIMEAIN +S+VI+CG Sbjct: 256 VVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCG 295 >ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine max] Length = 1403 Score = 125 bits (314), Expect = 4e-27 Identities = 69/100 (69%), Positives = 78/100 (78%) Frame = -3 Query: 301 DISLEKQPDEIISSSPTSCSIDEIKSTASKDGKDENCITNFNELSNIPNVSSRRPLTAPT 122 DIS++K DEI SS+ SCS DEIKST SKD DEN N NELSN+ + S+ R PT Sbjct: 275 DISIDKHLDEIRSST-MSCSTDEIKSTKSKDRTDEN--HNSNELSNLSDYSAPRWSNVPT 331 Query: 121 IVHVYRPPEVEEKRKDLPIVMMEQEIMEAINDHSNVIICG 2 +VHVYRP EVE+KRKDLPIVMMEQEIMEAIND S+VIICG Sbjct: 332 VVHVYRPTEVEDKRKDLPIVMMEQEIMEAINDRSSVIICG 371 >ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine max] Length = 1380 Score = 125 bits (313), Expect = 5e-27 Identities = 68/100 (68%), Positives = 76/100 (76%) Frame = -3 Query: 301 DISLEKQPDEIISSSPTSCSIDEIKSTASKDGKDENCITNFNELSNIPNVSSRRPLTAPT 122 DIS++ DEI SSP SCSIDEIK T SK +EN N NELSN+P S+ R PT Sbjct: 251 DISIDNHLDEI-RSSPMSCSIDEIKGTKSKYRTNEN--HNSNELSNLPGYSAPRRSNVPT 307 Query: 121 IVHVYRPPEVEEKRKDLPIVMMEQEIMEAINDHSNVIICG 2 +VHVYRP EVE+KRKDLPIVMMEQEIMEAIND S+VIICG Sbjct: 308 VVHVYRPTEVEDKRKDLPIVMMEQEIMEAINDRSSVIICG 347 >ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis vinifera] Length = 1414 Score = 103 bits (256), Expect = 2e-20 Identities = 54/88 (61%), Positives = 64/88 (72%) Frame = -3 Query: 265 SSSPTSCSIDEIKSTASKDGKDENCITNFNELSNIPNVSSRRPLTAPTIVHVYRPPEVEE 86 +S+PTS + D K+ SKD D N NF SN+P+ S + P+T PT+VHV RP EVE Sbjct: 295 NSTPTSTTADGQKNIKSKDVPDWNLNLNFRGTSNLPDCSLQ-PITTPTVVHVSRPTEVEN 353 Query: 85 KRKDLPIVMMEQEIMEAINDHSNVIICG 2 RKDLPIVMMEQEIMEAINDH+ VIICG Sbjct: 354 NRKDLPIVMMEQEIMEAINDHTAVIICG 381 >ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1| predicted protein [Populus trichocarpa] Length = 1130 Score = 94.7 bits (234), Expect = 7e-18 Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 1/92 (1%) Frame = -3 Query: 274 EIISSSPTSCSIDEIKSTASKDGK-DENCITNFNELSNIPNVSSRRPLTAPTIVHVYRPP 98 E+ S + S + + T+S GK +E+ + + SN P+ RP T PT+VHV RP Sbjct: 102 EVPKKSSQASSDHDARKTSSLMGKLNESSTVDLGKASNFPDFPLPRPPTTPTVVHVSRPD 161 Query: 97 EVEEKRKDLPIVMMEQEIMEAINDHSNVIICG 2 EVE+KRKDLPI+MMEQEIMEAIN+HS VIICG Sbjct: 162 EVEKKRKDLPIIMMEQEIMEAINEHSTVIICG 193