BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020367
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599440.1| RNA polymerase sigma factor [Medicago trunca...    83   3e-14
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...    83   3e-14

>ref|XP_003599440.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488488|gb|AES69691.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 265

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 67/156 (42%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
 Frame = +2

Query: 98  MSLTSLPTFPTLKKHPSLQVQPTLPT-APSKFGTTLVSSDHXXXXXXXXXXXXXXXXXXX 274
           MSLTSLPTFP+LK H SLQ    LPT  PSKFGT LV  D                    
Sbjct: 1   MSLTSLPTFPSLKTHHSLQ--QNLPTITPSKFGTNLVYGDALV----------------- 41

Query: 275 XXXXXXXXXXGIGKEWPFVESENGVVVRDRS-----IGFDLXXXXXXXXXXXDLGCLEEE 439
                      I      V   N  V   R+     IG D            +LGC+ EE
Sbjct: 42  -----------IVAATEAVALANDAVNAARNAAAAGIGIDDMRRKRRRKRRKNLGCMVEE 90

Query: 440 ENQIQNNCSRLKLLVGSATAGFLSSTEEAELCLGLK 547
           EN IQNN  R K++VGS T+GFLSST+EAELCL LK
Sbjct: 91  EN-IQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLK 125


>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 403

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 67/156 (42%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
 Frame = +2

Query: 98  MSLTSLPTFPTLKKHPSLQVQPTLPT-APSKFGTTLVSSDHXXXXXXXXXXXXXXXXXXX 274
           MSLTSLPTFP+LK H SLQ    LPT  PSKFGT LV  D                    
Sbjct: 1   MSLTSLPTFPSLKTHHSLQ--QNLPTITPSKFGTNLVYGDALV----------------- 41

Query: 275 XXXXXXXXXXGIGKEWPFVESENGVVVRDRS-----IGFDLXXXXXXXXXXXDLGCLEEE 439
                      I      V   N  V   R+     IG D            +LGC+ EE
Sbjct: 42  -----------IVAATEAVALANDAVNAARNAAAAGIGIDDMRRKRRRKRRKNLGCMVEE 90

Query: 440 ENQIQNNCSRLKLLVGSATAGFLSSTEEAELCLGLK 547
           EN IQNN  R K++VGS T+GFLSST+EAELCL LK
Sbjct: 91  EN-IQNNFLRQKVVVGSVTSGFLSSTDEAELCLCLK 125