BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020362
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595526.1| Pentatricopeptide repeat-containing protein ...   140   8e-32
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   118   4e-25
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|NP_171853.1| pentatricopeptide repeat-containing protein [Ar...   112   3e-23

>ref|XP_003595526.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484574|gb|AES65777.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 229

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/94 (74%), Positives = 79/94 (84%)
 Frame = +2

Query: 5   LQSNSYLSPTLKPVLYASLLQTCTKTASFIHGTSVHAHILKSGLQSDRFVGNSLLSLYFK 184
           L + S  + +LKPV+YASLLQT  KT SF HG SVHAH+LKSGL SDRFVGNSLL+LYFK
Sbjct: 38  LLNTSQPTLSLKPVIYASLLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFK 97

Query: 185 LGPGPHLAQARTVFDALSVKDVISWTSLISGYTR 286
           L PGPHL+ AR +FD+L VKDVISWTSLISGYTR
Sbjct: 98  LNPGPHLSHARHLFDSLHVKDVISWTSLISGYTR 131


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = +2

Query: 38  KPVLYASLLQTCTKTASFIHGTSVHAHILKSGLQSDRFVGNSLLSLYFKLGPGPHLAQAR 217
           KPVLYASLLQTCTK  +F HG  +HAH++KSGL+ DRFVGNSLL+LYFKL  G    + R
Sbjct: 58  KPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKL--GTDFPETR 115

Query: 218 TVFDALSVKDVISWTSLISGYTR 286
            VFD L VKDVISWTS+ISGY R
Sbjct: 116 KVFDGLFVKDVISWTSMISGYVR 138


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = +2

Query: 38  KPVLYASLLQTCTKTASFIHGTSVHAHILKSGLQSDRFVGNSLLSLYFKLGPGPHLAQAR 217
           KPVLYASLLQTCTK  +F HG  +HAH++KSGL+ DRFVGNSLL+LYFKL  G    + R
Sbjct: 117 KPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKL--GTDFPETR 174

Query: 218 TVFDALSVKDVISWTSLISGYTR 286
            VFD L VKDVISWTS+ISGY R
Sbjct: 175 KVFDGLFVKDVISWTSMISGYVR 197


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/83 (66%), Positives = 65/83 (78%)
 Frame = +2

Query: 38  KPVLYASLLQTCTKTASFIHGTSVHAHILKSGLQSDRFVGNSLLSLYFKLGPGPHLAQAR 217
           KP  YASLLQTCTK  SF HG   H+H +KSGL +DRFVGNSLL+LYFKL  GP+L +AR
Sbjct: 59  KPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKL--GPNLFEAR 116

Query: 218 TVFDALSVKDVISWTSLISGYTR 286
            VFD L  KD+ISWTS+I+GY +
Sbjct: 117 RVFDGLFYKDLISWTSMITGYVK 139



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 46/77 (59%)
 Frame = +2

Query: 50  YASLLQTCTKTASFIHGTSVHAHILKSGLQSDRFVGNSLLSLYFKLGPGPHLAQARTVFD 229
           + ++L  C        G  VHA ++ SGL  + FV +SL+ +Y   G    + Q++ VFD
Sbjct: 267 FGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMY---GKCRLVNQSQCVFD 323

Query: 230 ALSVKDVISWTSLISGY 280
            +SVK+++SWT+L+ GY
Sbjct: 324 RMSVKNLVSWTALLGGY 340


>ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03540 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16
           [Arabidopsis thaliana] gi|91805735|gb|ABE65596.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332189463|gb|AEE27584.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 609

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/80 (68%), Positives = 63/80 (78%)
 Frame = +2

Query: 41  PVLYASLLQTCTKTASFIHGTSVHAHILKSGLQSDRFVGNSLLSLYFKLGPGPHLAQART 220
           P LYASLLQTC K  SFIHG   HAH++KSGL++DR VGNSLLSLYFKLGPG  + + R 
Sbjct: 61  PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG--MRETRR 118

Query: 221 VFDALSVKDVISWTSLISGY 280
           VFD   VKD ISWTS++SGY
Sbjct: 119 VFDGRFVKDAISWTSMMSGY 138