BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020338
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638369.1| Pentatricopeptide repeat-containing protein ...   198   5e-49
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45
emb|CBI22748.3| unnamed protein product [Vitis vinifera]              166   3e-39
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   166   3e-39

>ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355504304|gb|AES85507.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  198 bits (504), Expect = 5e-49
 Identities = 97/114 (85%), Positives = 105/114 (92%)
 Frame = -1

Query: 594 PDVVAYTVMITGFVVAGELEKAQEMFQEMISREQVPNVFTYNSMIRGLCMSRKFDEACSM 415
           PDVVAYTVMITG+VVA ELEKAQEMF+EM+S+E VPNVFTYNSMIRGLCM+ KFDEACSM
Sbjct: 385 PDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSM 444

Query: 414 LKEMETKGCSPNSVVYITLVSCLRNAGKVADAREVIRQMMEKGKHVHLLPRFKG 253
            KEME KGCSPNSVVYITLVSCLRNAG+VADAREVI+QM E GK+ HLL RFKG
Sbjct: 445 FKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTETGKYAHLLSRFKG 498


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  192 bits (489), Expect = 3e-47
 Identities = 95/114 (83%), Positives = 102/114 (89%)
 Frame = -1

Query: 594 PDVVAYTVMITGFVVAGELEKAQEMFQEMISREQVPNVFTYNSMIRGLCMSRKFDEACSM 415
           PDVVAYTVMITG+VVAGE+EKA EM+Q+MISREQVPNVFTYNS+IRGLCM+ KFDEACSM
Sbjct: 364 PDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSM 423

Query: 414 LKEMETKGCSPNSVVYITLVSCLRNAGKVADAREVIRQMMEKGKHVHLLPRFKG 253
           LKEMETKGCSPNSVVY TL SCLRNAGK ADA EVIRQM EK KH  +  RFKG
Sbjct: 424 LKEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMTEKVKHADIHSRFKG 477


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  184 bits (468), Expect = 8e-45
 Identities = 90/114 (78%), Positives = 101/114 (88%)
 Frame = -1

Query: 594 PDVVAYTVMITGFVVAGELEKAQEMFQEMISREQVPNVFTYNSMIRGLCMSRKFDEACSM 415
           PDVVAYTVMITG+VVAGE+EKA +M+Q MISREQVPNVFTYNS+I+GLCM+ KFDEACSM
Sbjct: 364 PDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSM 423

Query: 414 LKEMETKGCSPNSVVYITLVSCLRNAGKVADAREVIRQMMEKGKHVHLLPRFKG 253
           LKEM+TKGCSPNS VY TL SCLRNAGK ADA EVIRQM EKGK+  +  RF+G
Sbjct: 424 LKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQMTEKGKYADIHSRFRG 477


>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  166 bits (420), Expect = 3e-39
 Identities = 81/119 (68%), Positives = 101/119 (84%)
 Frame = -1

Query: 594 PDVVAYTVMITGFVVAGELEKAQEMFQEMISREQVPNVFTYNSMIRGLCMSRKFDEACSM 415
           PDVV YTVMITG++VAGELE AQ +F+EM  + Q+PNVFTYNSMIRGLCM+ KF+EA SM
Sbjct: 401 PDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSM 460

Query: 414 LKEMETKGCSPNSVVYITLVSCLRNAGKVADAREVIRQMMEKGKHVHLLPRFKGRGYKR 238
           LKEME++GC+PN +VY TLV  LRNAGK+ +A EVIR M++KG++VHLL +FK  GY+R
Sbjct: 461 LKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLSKFK--GYRR 517


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  166 bits (420), Expect = 3e-39
 Identities = 81/119 (68%), Positives = 101/119 (84%)
 Frame = -1

Query: 594 PDVVAYTVMITGFVVAGELEKAQEMFQEMISREQVPNVFTYNSMIRGLCMSRKFDEACSM 415
           PDVV YTVMITG++VAGELE AQ +F+EM  + Q+PNVFTYNSMIRGLCM+ KF+EA SM
Sbjct: 397 PDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSM 456

Query: 414 LKEMETKGCSPNSVVYITLVSCLRNAGKVADAREVIRQMMEKGKHVHLLPRFKGRGYKR 238
           LKEME++GC+PN +VY TLV  LRNAGK+ +A EVIR M++KG++VHLL +FK  GY+R
Sbjct: 457 LKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLSKFK--GYRR 513