BLASTX nr result

ID: Glycyrrhiza24_contig00020331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020331
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36557.1| unknown [Medicago truncatula]                          432   e-119
ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783...   417   e-114
ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycin...   409   e-112
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   372   e-101
ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuc...   371   e-100

>gb|AFK36557.1| unknown [Medicago truncatula]
          Length = 268

 Score =  432 bits (1111), Expect = e-119
 Identities = 219/266 (82%), Positives = 227/266 (85%), Gaps = 1/266 (0%)
 Frame = -2

Query: 1059 MAQQPFDPYYLYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ 880
            MA Q FD YY YQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGR NQ
Sbjct: 1    MAMQQFDQYYHYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ 60

Query: 879  VVAFATFFNHQSAMAALHALNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRS 700
            VVAFATFFNHQ+AM ALH+LNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRS
Sbjct: 61   VVAFATFFNHQAAMQALHSLNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRS 120

Query: 699  KGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPVASEQHEK-GGN 523
            KGEANVQ                   NHGDIA  QSG+  VGSD  +PVA  QH K GG+
Sbjct: 121  KGEANVQGSSSDDGESDPDEPSENGSNHGDIATAQSGDAVVGSDNHVPVARAQHGKGGGD 180

Query: 522  GGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFEEIDQAAKVIE 343
            GGPCSTLFIANLGPNCTEDELKQALSVY GFN+VKMRSRGGMPVAFADFEEIDQA KV+E
Sbjct: 181  GGPCSTLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFEEIDQAVKVME 240

Query: 342  ELQSSLLPSSDRGGMHIEYARSKMRK 265
            ELQ S LPSSDRGGMHIEYARS+MRK
Sbjct: 241  ELQGSSLPSSDRGGMHIEYARSRMRK 266


>ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
          Length = 264

 Score =  417 bits (1071), Expect = e-114
 Identities = 213/265 (80%), Positives = 221/265 (83%)
 Frame = -2

Query: 1059 MAQQPFDPYYLYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ 880
            MAQ PFDP+YLYQ DE+SNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGR NQ
Sbjct: 1    MAQPPFDPFYLYQHDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQ 60

Query: 879  VVAFATFFNHQSAMAALHALNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRS 700
            VVAFATFFNHQSAMAALHALNGVKFDPQ+GSVLHIELARSNSRRKRKPG GAYVVIDKRS
Sbjct: 61   VVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDKRS 120

Query: 699  KGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPVASEQHEKGGNG 520
            KGE ++Q                   N GD+A   S ETAVGSD A+ V  EQH KG  G
Sbjct: 121  KGEPDLQGSSSEDGDSDPDEPSDSGDNQGDLAIMTSDETAVGSDNAVSV--EQHGKGSTG 178

Query: 519  GPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFEEIDQAAKVIEE 340
            G CSTLFIANLGPNCTEDELKQA S Y GFNMVKMRSRGGMPVAF DFEE  QAAKV+EE
Sbjct: 179  GLCSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEETHQAAKVMEE 238

Query: 339  LQSSLLPSSDRGGMHIEYARSKMRK 265
            LQ SLLPSSDRGGMHIEYARSKMRK
Sbjct: 239  LQGSLLPSSDRGGMHIEYARSKMRK 263


>ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
            gi|255636681|gb|ACU18677.1| unknown [Glycine max]
          Length = 265

 Score =  409 bits (1052), Expect = e-112
 Identities = 214/266 (80%), Positives = 220/266 (82%), Gaps = 1/266 (0%)
 Frame = -2

Query: 1059 MAQQPFDPYYLYQQ-DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGN 883
            MA  P DPYYLYQQ DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGR N
Sbjct: 1    MAHPPLDPYYLYQQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRAN 60

Query: 882  QVVAFATFFNHQSAMAALHALNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKR 703
            QVVAFATFFNHQSAMAALHALNGVKFDPQ+GSVLHIELARSNSRRKRKPGG A VVIDKR
Sbjct: 61   QVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGGEACVVIDKR 120

Query: 702  SKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPVASEQHEKGGN 523
            S GE ++Q                   N G+IA   S ETAVGSD A+ V  EQH KG  
Sbjct: 121  STGEPDLQGSSSDDGDSDPDEPSDSGDNQGNIAIMTSDETAVGSDNAVSV--EQHGKGSA 178

Query: 522  GGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFEEIDQAAKVIE 343
            GG CSTLFIANLGPNCTEDELKQA SVY GFNMVKMRSRGGMPVAF DFEE DQAAKV+E
Sbjct: 179  GGLCSTLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSRGGMPVAFVDFEETDQAAKVVE 238

Query: 342  ELQSSLLPSSDRGGMHIEYARSKMRK 265
            ELQ SLLPSSDRGGMHIEYARSKMRK
Sbjct: 239  ELQGSLLPSSDRGGMHIEYARSKMRK 264


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
            sativus]
          Length = 262

 Score =  372 bits (956), Expect = e-101
 Identities = 192/270 (71%), Positives = 211/270 (78%), Gaps = 5/270 (1%)
 Frame = -2

Query: 1059 MAQQPFDPYYLYQQ-----DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYT 895
            MA  P+DPYYLY Q      ERSNINTLF+SGLPDDVKAREIHNLFRRRPGFDSCQLKYT
Sbjct: 1    MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYT 60

Query: 894  GRGNQVVAFATFFNHQSAMAALHALNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVV 715
            GRGNQVVAFATF+NHQSA+ ALHALNGVKFDPQSGSVLHIELARSNSRRK KPGGGAYVV
Sbjct: 61   GRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVV 120

Query: 714  IDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPVASEQHE 535
            IDKR K +AN Q                   +     A QS E  V    A+    E HE
Sbjct: 121  IDKRKKTDANSQ--------ETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHE 172

Query: 534  KGGNGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFEEIDQAA 355
            K  +GGPCSTLFIANLGPNC EDELK+ L  YPGFN++K+R++ GMPVAFADFE+I+QA+
Sbjct: 173  K-NDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQAS 231

Query: 354  KVIEELQSSLLPSSDRGGMHIEYARSKMRK 265
            KV+EELQ S+LPSSDRGGMHIEYARSKMRK
Sbjct: 232  KVMEELQGSVLPSSDRGGMHIEYARSKMRK 261


>ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
            B''-like [Cucumis sativus]
          Length = 262

 Score =  371 bits (953), Expect = e-100
 Identities = 192/270 (71%), Positives = 210/270 (77%), Gaps = 5/270 (1%)
 Frame = -2

Query: 1059 MAQQPFDPYYLYQQ-----DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYT 895
            MA  P+DPYYLY Q      ERSNINTLF+SGLPDDVKAREIHNLFRRRPGFDSCQLKYT
Sbjct: 1    MAHLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYT 60

Query: 894  GRGNQVVAFATFFNHQSAMAALHALNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVV 715
            GRGNQVVAFATF+NHQSA+ ALHALNGVKFDPQSGSVLHIELARSNSRRK KPGGGAYVV
Sbjct: 61   GRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVV 120

Query: 714  IDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPVASEQHE 535
            IDKR K  AN Q                   +     A QS E  V    A+    E HE
Sbjct: 121  IDKRKKPXANSQ--------ETSSDDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHE 172

Query: 534  KGGNGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFEEIDQAA 355
            K  +GGPCSTLFIANLGPNC EDELK+ L  YPGFN++K+R++ GMPVAFADFE+I+QA+
Sbjct: 173  K-NDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQAS 231

Query: 354  KVIEELQSSLLPSSDRGGMHIEYARSKMRK 265
            KV+EELQ S+LPSSDRGGMHIEYARSKMRK
Sbjct: 232  KVMEELQGSVLPSSDRGGMHIEYARSKMRK 261


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