BLASTX nr result

ID: Glycyrrhiza24_contig00020305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020305
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522448.1| PREDICTED: uncharacterized protein LOC100796...   187   1e-45
ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]   159   2e-37
ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]   154   9e-36
ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula] gi|...   147   9e-34

>ref|XP_003522448.1| PREDICTED: uncharacterized protein LOC100796540 [Glycine max]
          Length = 540

 Score =  187 bits (474), Expect = 1e-45
 Identities = 93/121 (76%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
 Frame = -2

Query: 359 KVMPRSVAAVEAEALTNGKGSDSIREE--GSPPAWKRVDSKELGIHNSMIGISTRKVLNG 186
           KV+PR +AAVEAEA TN + S SIREE  G  PAWKR++ +ELGI NSMIG +T+KVLNG
Sbjct: 35  KVVPRFLAAVEAEAPTNEQTSVSIREEEIGKAPAWKRLNYEELGIRNSMIGSTTKKVLNG 94

Query: 185 LKKRGYDVYLAGGCVRDLILKKTPKDFDIITSAELKEVMKIFSWCEIVGKRFPICHVHID 6
           LKK+GYDVYL GGCVRDLILKKTPKDFDIITSAELKEV + FSW EIVGKRFP+CHVH+D
Sbjct: 95  LKKKGYDVYLVGGCVRDLILKKTPKDFDIITSAELKEVTRTFSWSEIVGKRFPVCHVHMD 154

Query: 5   D 3
           D
Sbjct: 155 D 155


>ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
          Length = 527

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 9/128 (7%)
 Frame = -2

Query: 362 RKVMPRSVAAVEAEALTN-----GKGSDS--IREEGSPP--AWKRVDSKELGIHNSMIGI 210
           RK++P+S+  VE E         GKG+    I E  +    AWK+++SKELG+ NSMI +
Sbjct: 25  RKLVPKSLPTVEVEECRGSTPEQGKGTSEKLILENNNSKVQAWKKLNSKELGLRNSMIAV 84

Query: 209 STRKVLNGLKKRGYDVYLAGGCVRDLILKKTPKDFDIITSAELKEVMKIFSWCEIVGKRF 30
            T+KVLN LKK+G+DVYL GGCVRDLILK+TPKDFDIITSA+LKEV K FSWCEIVGKRF
Sbjct: 85  PTKKVLNVLKKKGHDVYLVGGCVRDLILKQTPKDFDIITSADLKEVRKTFSWCEIVGKRF 144

Query: 29  PICHVHID 6
           PICHVH+D
Sbjct: 145 PICHVHMD 152


>ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
          Length = 538

 Score =  154 bits (388), Expect = 9e-36
 Identities = 79/128 (61%), Positives = 95/128 (74%), Gaps = 9/128 (7%)
 Frame = -2

Query: 362 RKVMPRSVAAVEAEALTN-------GKGSDSIREEGSPP--AWKRVDSKELGIHNSMIGI 210
           RKV+P+S+  VE E           G   + I E  +    AWK+++SKE+G+ NSMI I
Sbjct: 25  RKVVPKSLPRVEVEERRGSHREQDKGTSEELISENNNSKVRAWKKLNSKEIGLRNSMIAI 84

Query: 209 STRKVLNGLKKRGYDVYLAGGCVRDLILKKTPKDFDIITSAELKEVMKIFSWCEIVGKRF 30
            T+KVLN LKK+G+DVYL GGCVRDLILK+TPKDFDIITSA+LKEV K FS CEIVGKRF
Sbjct: 85  PTKKVLNVLKKKGHDVYLVGGCVRDLILKQTPKDFDIITSADLKEVRKTFSLCEIVGKRF 144

Query: 29  PICHVHID 6
           PICHVH+D
Sbjct: 145 PICHVHMD 152


>ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|222858834|gb|EEE96381.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/122 (61%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
 Frame = -2

Query: 362 RKVMPRSVAAVEAEALTNG--KGSDSIREEGSPPAWKRVDSKELGIHNSMIGISTRKVLN 189
           +KV   SVAA+E   +     KG+     +   P WK++ SKELG+ NS+I + T+KVLN
Sbjct: 25  QKVRFSSVAAIETLDVQENVIKGNSRNLGDCKAPEWKKLSSKELGLSNSLISMPTKKVLN 84

Query: 188 GLKKRGYDVYLAGGCVRDLILKKTPKDFDIITSAELKEVMKIFSWCEIVGKRFPICHVHI 9
           GLKK GY+VYL GGCVRDLILK+ PKDFDIITSAELKEV++ FS CEIVGK FPICHVH+
Sbjct: 85  GLKKNGYEVYLVGGCVRDLILKRIPKDFDIITSAELKEVVRTFSHCEIVGKWFPICHVHV 144

Query: 8   DD 3
            D
Sbjct: 145 GD 146


>ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula]
           gi|355524590|gb|AET05044.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 543

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/146 (52%), Positives = 94/146 (64%), Gaps = 27/146 (18%)
 Frame = -2

Query: 362 RKVMPRSVAAVEAEALTNGKGSDSIREEGSPPAWKRVDSKELGIHNSMIGISTRKVLNGL 183
           RKV+PRSV +VE E          + ++   PAWK+++SKELG  NSMI    +KVLN L
Sbjct: 26  RKVVPRSVPSVEPEECNRSSNLKQVNKKA--PAWKKMNSKELGFRNSMIASPIKKVLNML 83

Query: 182 KKRG---------------------------YDVYLAGGCVRDLILKKTPKDFDIITSAE 84
           KK+G                           Y+VYL GGCVRD+IL++TPKDFDI+TSA+
Sbjct: 84  KKKGMFCCVSACYLNSKLSRSVTLFLVVVVGYNVYLVGGCVRDMILRQTPKDFDILTSAD 143

Query: 83  LKEVMKIFSWCEIVGKRFPICHVHID 6
           LKEVM+ FSWCEIVGKRFPICHVH+D
Sbjct: 144 LKEVMRTFSWCEIVGKRFPICHVHMD 169


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