BLASTX nr result

ID: Glycyrrhiza24_contig00020274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020274
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241040.1| uncharacterized protein LOC100818325 [Glycin...   149   3e-34
ref|XP_003539730.1| PREDICTED: LOW QUALITY PROTEIN: programmed c...   140   2e-31
ref|XP_002531647.1| pcdc2/rp-8, putative [Ricinus communis] gi|2...   123   3e-26
ref|XP_002302735.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
emb|CBI36901.3| unnamed protein product [Vitis vinifera]              114   1e-23

>ref|NP_001241040.1| uncharacterized protein LOC100818325 [Glycine max]
           gi|255645769|gb|ACU23377.1| unknown [Glycine max]
          Length = 406

 Score =  149 bits (377), Expect = 3e-34
 Identities = 70/108 (64%), Positives = 79/108 (73%)
 Frame = +2

Query: 284 MDTDAIGDPINKLKAMRMXXXXXXXXXXXXXXXXXXXXXPVTLGFVDKPKHHWSLSRQYF 463
           MDTDA GDP++KLKA++                      P+TLGFVDKPK+ WSL RQYF
Sbjct: 1   MDTDATGDPVDKLKAIQNDDVEYQDEDDDFDDEEEEEDDPITLGFVDKPKNEWSLRRQYF 60

Query: 464 PSKAGGVPAWLDPLNIPSGRSSVCDICGDPLLFMLQVYAPIEKESTFH 607
           PSK GGVPAWLDPLNIPSGRSSVCDICGDPL  +LQVYAP +KE+TFH
Sbjct: 61  PSKTGGVPAWLDPLNIPSGRSSVCDICGDPLQLLLQVYAPTDKETTFH 108


>ref|XP_003539730.1| PREDICTED: LOW QUALITY PROTEIN: programmed cell death protein
           2-like [Glycine max]
          Length = 408

 Score =  140 bits (353), Expect = 2e-31
 Identities = 70/110 (63%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
 Frame = +2

Query: 284 MDTDAIGDPINKLKAMRMXXXXXXXXXXXXXXXXXXXXX--PVTLGFVDKPKHHWSLSRQ 457
           MDTDAIGD ++KLKA++                        P+TLGFVDKPK++WSL RQ
Sbjct: 1   MDTDAIGDLVDKLKAIQNDNVEDQDQDDDFDDDDDDDEEHEPITLGFVDKPKNNWSLRRQ 60

Query: 458 YFPSKAGGVPAWLDPLNIPSGRSSVCDICGDPLLFMLQVYAPIEKESTFH 607
           YFPSKAGGVPAWLDPLNIPSG S VCD CGDPL F+LQVYAP EKE+TFH
Sbjct: 61  YFPSKAGGVPAWLDPLNIPSGGSFVCDNCGDPLQFLLQVYAPTEKETTFH 110


>ref|XP_002531647.1| pcdc2/rp-8, putative [Ricinus communis] gi|223528732|gb|EEF30743.1|
           pcdc2/rp-8, putative [Ricinus communis]
          Length = 385

 Score =  123 bits (308), Expect = 3e-26
 Identities = 54/70 (77%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = +2

Query: 401 PVTLGFVDKPKHHWSLSRQYFPSKAGGVPAWLDPLNIPSGRSSVCDICGDPLLFMLQVYA 580
           PVTLGFV+KP++ WSLSRQ FPSKAGGVPAW+DP+N+PSG+S++CDICGDPL F+LQVYA
Sbjct: 16  PVTLGFVEKPRNCWSLSRQLFPSKAGGVPAWMDPINLPSGKSNLCDICGDPLQFLLQVYA 75

Query: 581 PIE-KESTFH 607
           P+  KESTFH
Sbjct: 76  PVSGKESTFH 85


>ref|XP_002302735.1| predicted protein [Populus trichocarpa] gi|222844461|gb|EEE82008.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/70 (78%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
 Frame = +2

Query: 401 PVTLGFVDKPKHHWSLSRQYFPSKAGGVPAWLDPLNIPSGRSSVCDICGDPLLFMLQVYA 580
           PVTLGF++K K+ WSL RQ FPSKAGGVPAWLDP+N+PSGRS VCDIC +PL F+LQVYA
Sbjct: 47  PVTLGFLEKTKNCWSLLRQVFPSKAGGVPAWLDPVNLPSGRSCVCDICEEPLQFLLQVYA 106

Query: 581 PI-EKESTFH 607
           PI EKESTFH
Sbjct: 107 PITEKESTFH 116


>emb|CBI36901.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/70 (75%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
 Frame = +2

Query: 401 PVTLGFVDKPKHHWSLSRQYFPSKAGGVPAWLDPLNIPSGRSSVCDICGDPLLFMLQVYA 580
           PVTLGFV+KPK+ WSL    FPSKAGG+PAWLDP+N+PSG+SS+CDIC  PL F+LQVYA
Sbjct: 69  PVTLGFVEKPKNGWSLLCHMFPSKAGGLPAWLDPINLPSGKSSLCDICQTPLQFLLQVYA 128

Query: 581 PI-EKESTFH 607
           PI EKESTFH
Sbjct: 129 PISEKESTFH 138


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