BLASTX nr result

ID: Glycyrrhiza24_contig00020273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020273
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34406.1| unknown [Lotus japonicus]                               91   1e-16
gb|ADD30383.1| photosystem II protein Z [Euonymus americanus]          91   1e-16
ref|YP_001468305.1| photosystem II protein Z [Ipomoea purpurea] ...    91   1e-16
ref|YP_001123196.1| hypothetical protein ArhiCp017 [Arabis hirsu...    91   1e-16
ref|YP_740562.1| photosystem II protein Z [Platanus occidentalis...    91   1e-16

>gb|AFK34406.1| unknown [Lotus japonicus]
          Length = 80

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/44 (97%), Positives = 43/44 (97%)
 Frame = +3

Query: 141 MRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEANTTGTLINKM 272
           MRELRIPTRNTN IHNDVPENTTFLLLDQPSGEANTTGTLINKM
Sbjct: 1   MRELRIPTRNTNAIHNDVPENTTFLLLDQPSGEANTTGTLINKM 44


>gb|ADD30383.1| photosystem II protein Z [Euonymus americanus]
          Length = 62

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -2

Query: 271 ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 137
           ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS
Sbjct: 18  ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 62


>ref|YP_001468305.1| photosystem II protein Z [Ipomoea purpurea]
           gi|157056755|gb|ABV02345.1| photosystem II protein Z
           [Ipomoea purpurea]
          Length = 62

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -2

Query: 271 ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 137
           ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS
Sbjct: 18  ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 62


>ref|YP_001123196.1| hypothetical protein ArhiCp017 [Arabis hirsuta]
           gi|139389947|ref|YP_001123547.1| hypothetical protein
           DrneCp017 [Draba nemorosa] gi|134286394|dbj|BAF50020.1|
           hypothetical protein [Arabis hirsuta]
           gi|134286749|dbj|BAF50371.1| hypothetical protein [Draba
           nemorosa]
          Length = 62

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -2

Query: 271 ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 137
           ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS
Sbjct: 18  ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 62


>ref|YP_740562.1| photosystem II protein Z [Platanus occidentalis]
           gi|114054381|gb|ABI49775.1| photosystem II protein Z
           [Platanus occidentalis]
          Length = 62

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -2

Query: 271 ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 137
           ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS
Sbjct: 18  ILLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSLIS 62


Top