BLASTX nr result

ID: Glycyrrhiza24_contig00020261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020261
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786...   538   e-150
ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-li...   528   e-147
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   385   e-104
ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   379   e-103
emb|CBI22967.3| unnamed protein product [Vitis vinifera]              378   e-102

>ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786571 [Glycine max]
          Length = 674

 Score =  538 bits (1386), Expect = e-150
 Identities = 284/366 (77%), Positives = 307/366 (83%), Gaps = 4/366 (1%)
 Frame = -2

Query: 1293 FRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEMRHGAHQRHRASQSTPPL 1114
            FRK+  LKK  INV   VSMNT FPLAKLHGPISPELME WEMRH  H+R R S +   L
Sbjct: 320  FRKLNTLKKNSINVRQPVSMNTLFPLAKLHGPISPELMEMWEMRHHVHERQRDSLAL--L 377

Query: 1113 YEKLRQSLINEGNETGATFFNSEADNDDNEYDSGNHDFDMPDNSYMDEDLPPCNKEHGID 934
            YEKLRQSL+NEGN+TG TFFNSEADNDDNEYD GN DFD PDN+YM+EDLPP + EH  D
Sbjct: 378  YEKLRQSLVNEGNKTGGTFFNSEADNDDNEYDGGNPDFDTPDNAYMEEDLPPFSNEHEFD 437

Query: 933  DDHVKAYEDVDLQYPNSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNL 754
            D H+   E VDL    SQ SLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIE+NL
Sbjct: 438  DAHINPDEAVDL----SQASLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIENNL 493

Query: 753  EEQESHPPFDIQDYGVRILDK---LSLEASSGSVLSFSDLVKGQEKYDVSRSFSSLLQLV 583
            EEQESHPPFDIQDYG RILDK   LSLEASS  VLSFSDLVKGQEK+DV+RSFSSLLQLV
Sbjct: 494  EEQESHPPFDIQDYGERILDKFSLLSLEASSSGVLSFSDLVKGQEKHDVARSFSSLLQLV 553

Query: 582  NNGEVDLERNGIDGGSVCYTAVNPFHVRLLKHDRK-WEDVQFRLPKKRGKSPTKKPSTKG 406
            NNG+V LERNG+D GSVC T+V+PFHVRLLK   K  ++ Q RLPKKR KSPTKKPSTKG
Sbjct: 554  NNGDVTLERNGVD-GSVCCTSVDPFHVRLLKQSSKEGDNAQLRLPKKRAKSPTKKPSTKG 612

Query: 405  EKNKTRREKSPTSSSSRKYGSRGLSPPANCKYSVKLGKVSAMKFSPEAKRRRRSQYVEPV 226
            +KNKT REKSP+SS   +YGS G+SPP NCK+SVKLGKVSAMK SPEAKRRRRSQYVEPV
Sbjct: 613  DKNKTVREKSPSSS---RYGSTGVSPPTNCKFSVKLGKVSAMK-SPEAKRRRRSQYVEPV 668

Query: 225  NLHSAG 208
            NLHSAG
Sbjct: 669  NLHSAG 674


>ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
          Length = 673

 Score =  528 bits (1359), Expect = e-147
 Identities = 279/366 (76%), Positives = 303/366 (82%), Gaps = 4/366 (1%)
 Frame = -2

Query: 1293 FRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEMRHGAHQRHRASQSTPPL 1114
            FRKV  LKK  INV   VSMNT FPLAKL GPISPELME WEMRH  H+R R SQ+  PL
Sbjct: 319  FRKVNTLKKNSINVRLPVSMNTLFPLAKLRGPISPELMEMWEMRHLVHERQRDSQA--PL 376

Query: 1113 YEKLRQSLINEGNETGATFFNSEADNDDNEYDSGNHDFDMPDNSYMDEDLPPCNKEHGID 934
            YEKLRQSL+NEGNETG TFFNSEADNDDNEYD GN DFDMPDN+YM+EDLP  + EH  D
Sbjct: 377  YEKLRQSLVNEGNETGGTFFNSEADNDDNEYDGGNPDFDMPDNAYMEEDLPSFSNEHEFD 436

Query: 933  DDHVKAYEDVDLQYPNSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNL 754
            D HV   E VDL    SQTSLEDLCRSHLNALLASIAETEKQTEMA RVS WKQ+IE NL
Sbjct: 437  DAHVNPDEAVDL----SQTSLEDLCRSHLNALLASIAETEKQTEMATRVSAWKQKIEDNL 492

Query: 753  EEQESHPPFDIQDYGVRILDK---LSLEASSGSVLSFSDLVKGQEKYDVSRSFSSLLQLV 583
            EEQ+ HPPFDIQDYG RILDK   LSLEASS  VLSFSDLVKGQ KYDV+RSFSSLLQLV
Sbjct: 493  EEQDLHPPFDIQDYGERILDKFSLLSLEASSSGVLSFSDLVKGQNKYDVARSFSSLLQLV 552

Query: 582  NNGEVDLERNGIDGGSVCYTAVNPFHVRLLKH-DRKWEDVQFRLPKKRGKSPTKKPSTKG 406
            NNG+V LERNG+D GSVCY++VNPFHV+LLK   ++ E VQ RLPKKR KSPTK PST+G
Sbjct: 553  NNGDVALERNGVD-GSVCYSSVNPFHVKLLKQKSKEREGVQLRLPKKRAKSPTKNPSTQG 611

Query: 405  EKNKTRREKSPTSSSSRKYGSRGLSPPANCKYSVKLGKVSAMKFSPEAKRRRRSQYVEPV 226
            +KNKT R+KSP+SS   ++GS G+SPP NCK+SVKLGKVS MK SPEAKRRRRSQYVEPV
Sbjct: 612  DKNKTVRKKSPSSS---RHGSTGVSPPTNCKFSVKLGKVSGMK-SPEAKRRRRSQYVEPV 667

Query: 225  NLHSAG 208
            NLHS G
Sbjct: 668  NLHSTG 673


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  385 bits (989), Expect = e-104
 Identities = 201/363 (55%), Positives = 267/363 (73%), Gaps = 2/363 (0%)
 Frame = -2

Query: 1293 FRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEMRHGAHQRHRASQSTPPL 1114
            F+KVKA ++ G+  +    + T FPLAK+HGPISPEL E WE +H A +R +  Q TPPL
Sbjct: 319  FKKVKAFRRHGVCSTKHNILTTQFPLAKMHGPISPELTEIWE-KHRACERQQEPQ-TPPL 376

Query: 1113 YEKLRQSLINEGNETGATFFNSEADNDDNEYDSGNHDF--DMPDNSYMDEDLPPCNKEHG 940
            YEKLR SLI+  ++T + + N E + +D  YDSG +DF  +MP + YMD+DLP   ++H 
Sbjct: 377  YEKLRNSLIHGDSQTFSAYSNVEDNKEDGGYDSGVNDFGDEMPHDMYMDDDLPLHQEQH- 435

Query: 939  IDDDHVKAYEDVDLQYPNSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEH 760
              DD    ++ +D        +LEDLCRSHL+ALLA+IAETEKQTE+AARVSTWKQ+IEH
Sbjct: 436  --DDGAACFDSID--------NLEDLCRSHLDALLANIAETEKQTELAARVSTWKQKIEH 485

Query: 759  NLEEQESHPPFDIQDYGVRILDKLSLEASSGSVLSFSDLVKGQEKYDVSRSFSSLLQLVN 580
            +LEEQ+  PPFDI DYG RIL+KLS +A +G+V+SFS++V GQEK+DV+RSFS+LLQLVN
Sbjct: 486  DLEEQDLRPPFDIHDYGDRILEKLSHKAENGNVMSFSEVVSGQEKHDVARSFSALLQLVN 545

Query: 579  NGEVDLERNGIDGGSVCYTAVNPFHVRLLKHDRKWEDVQFRLPKKRGKSPTKKPSTKGEK 400
            N +V+L+R G DG SVCYT  NPF+++LL  D++ E+VQ R  KKR KSPTKK  TKG++
Sbjct: 546  NEDVNLDRGGTDGESVCYTDANPFYIKLLNRDKRREEVQLRSTKKRAKSPTKKECTKGKR 605

Query: 399  NKTRREKSPTSSSSRKYGSRGLSPPANCKYSVKLGKVSAMKFSPEAKRRRRSQYVEPVNL 220
            +K+  E  P  SSS    +  L P  NCK+SVKLGK++ ++ +PE KRRRRS+  EPV+L
Sbjct: 606  DKSEIENRPPVSSS---STTALQPQPNCKFSVKLGKINPIRCTPERKRRRRSRIAEPVDL 662

Query: 219  HSA 211
            HS+
Sbjct: 663  HSS 665


>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
            gi|223544047|gb|EEF45573.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 667

 Score =  379 bits (973), Expect = e-103
 Identities = 197/366 (53%), Positives = 266/366 (72%), Gaps = 5/366 (1%)
 Frame = -2

Query: 1293 FRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEMRHGAHQRHRASQSTPPL 1114
            FRKVK  ++  +  + + S+ T FPLA++ G ISPEL E WE R    ++  ++ S PPL
Sbjct: 315  FRKVKPYRRNVVKSARQTSITTMFPLARMRGTISPELTEIWEARFSRSEKTESADS-PPL 373

Query: 1113 YEKLRQSLINEGNETGATFFNSEADNDDNEYDSGNHDF-----DMPDNSYMDEDLPPCNK 949
            YEKLRQSL N G     TF N+E D++ NE+DSG  DF     D+P+N YMDEDL   + 
Sbjct: 374  YEKLRQSLSNGGYNNSDTFGNAENDDEGNEHDSGVPDFGQPDDDIPENMYMDEDL---HH 430

Query: 948  EHGIDDDHVKAYEDVDLQYPNSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQR 769
            E      H    E    + P+SQ SLEDLCRSHL+ALLA+IAETEKQTE+A RVS+WKQ+
Sbjct: 431  EKVGSSTHFDINEAFGNEDPSSQASLEDLCRSHLDALLANIAETEKQTELATRVSSWKQK 490

Query: 768  IEHNLEEQESHPPFDIQDYGVRILDKLSLEASSGSVLSFSDLVKGQEKYDVSRSFSSLLQ 589
            IEHNLEEQ+S P FDI  YG RILDKLSLEA+  +V+SF+D+VKGQEK+DV+R+FS+LLQ
Sbjct: 491  IEHNLEEQDSRPSFDIHAYGERILDKLSLEANGENVMSFADVVKGQEKHDVARTFSALLQ 550

Query: 588  LVNNGEVDLERNGIDGGSVCYTAVNPFHVRLLKHDRKWEDVQFRLPKKRGKSPTKKPSTK 409
            LVNNG+V+LER+G+ G SVCYTA+NPFH++LL HD++ +D+QFRL KKR KSP ++   K
Sbjct: 551  LVNNGDVNLERSGVGGMSVCYTAMNPFHIQLLNHDKRRKDLQFRLSKKRVKSPLRRGCNK 610

Query: 408  GEKNKTRREKSPTSSSSRKYGSRGLSPPANCKYSVKLGKVSAMKFSPEAKRRRRSQYVEP 229
            G  +K+ +E SP+ +SS+  G+          ++VKLGK+   + +PE+K+RRR+++VEP
Sbjct: 611  GSGDKSGKETSPSINSSQLNGN----------FTVKLGKIGGARCTPESKKRRRARFVEP 660

Query: 228  VNLHSA 211
            V++HS+
Sbjct: 661  VDIHSS 666


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  378 bits (971), Expect = e-102
 Identities = 201/375 (53%), Positives = 269/375 (71%), Gaps = 14/375 (3%)
 Frame = -2

Query: 1293 FRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEMRHGAHQRHRASQSTPPL 1114
            F+KVKA ++ G+  +    + T FPLAK+HGPISPEL E WE +H A +R +  Q TPPL
Sbjct: 919  FKKVKAFRRHGVCSTKHNILTTQFPLAKMHGPISPELTEIWE-KHRACERQQEPQ-TPPL 976

Query: 1113 YEKLRQSLINEGNETGATFFNSEADNDDNEYDSGNHDF--DMPDNSYMDEDLP------- 961
            YEKLR SLI+  ++T + + N E + +D  YDSG +DF  +MP + YMD+DLP       
Sbjct: 977  YEKLRNSLIHGDSQTFSAYSNVEDNKEDGGYDSGVNDFGDEMPHDMYMDDDLPLHQEQVR 1036

Query: 960  ----PCNKEHGID-DDHVKAYEDVDLQYPNSQTSLEDLCRSHLNALLASIAETEKQTEMA 796
                 C +++ +  DD    ++ +D        +LEDLCRSHL+ALLA+IAETEKQTE+A
Sbjct: 1037 LPVLMCQEQNIMHHDDGAACFDSID--------NLEDLCRSHLDALLANIAETEKQTELA 1088

Query: 795  ARVSTWKQRIEHNLEEQESHPPFDIQDYGVRILDKLSLEASSGSVLSFSDLVKGQEKYDV 616
            ARVSTWKQ+IEH+LEEQ+  PPFDI DYG RIL+KLS +A +G+V+SFS++V GQEK+DV
Sbjct: 1089 ARVSTWKQKIEHDLEEQDLRPPFDIHDYGDRILEKLSHKAENGNVMSFSEVVSGQEKHDV 1148

Query: 615  SRSFSSLLQLVNNGEVDLERNGIDGGSVCYTAVNPFHVRLLKHDRKWEDVQFRLPKKRGK 436
            +RSFS+LLQLVNN +V+L+R G DG SVCYT  NPF+++LL  D++ E+VQ R  KKR K
Sbjct: 1149 ARSFSALLQLVNNEDVNLDRGGTDGESVCYTDANPFYIKLLNRDKRREEVQLRSTKKRAK 1208

Query: 435  SPTKKPSTKGEKNKTRREKSPTSSSSRKYGSRGLSPPANCKYSVKLGKVSAMKFSPEAKR 256
            SPTKK  TKG+++K+  E  P  SSS    +  L P  NCK+SVKLGK++ ++ +PE KR
Sbjct: 1209 SPTKKECTKGKRDKSEIENRPPVSSS---STTALQPQPNCKFSVKLGKINPIRCTPERKR 1265

Query: 255  RRRSQYVEPVNLHSA 211
            RRRS+  EPV+LHS+
Sbjct: 1266 RRRSRIAEPVDLHSS 1280


Top