BLASTX nr result

ID: Glycyrrhiza24_contig00020227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020227
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...   234   4e-60
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   233   1e-59
ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like ...   229   1e-58
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...   224   6e-57
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...   224   7e-57

>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1641

 Score =  234 bits (598), Expect = 4e-60
 Identities = 113/136 (83%), Positives = 122/136 (89%)
 Frame = -1

Query: 410 VAERLHDKSLLVKMYTLERLAEIYRVFCENSSDTDNPSEYDWIPGKILRCFYDKDFRSDT 231
           VAERL DKSLLVK YT+ERL E+YRV CE SSD  NP+EY+WIPGKILRCFYDKDFRSD 
Sbjct: 385 VAERLRDKSLLVKKYTMERLTEVYRVACEKSSDNVNPNEYNWIPGKILRCFYDKDFRSDI 444

Query: 230 IESVLCGSLFPPEFSIKDMVKHWVEIFSGLDKVEVKALEKILEQKQRLQEEMHKYLSLRK 51
           IESVLCGSLFP EFSI D+VKHW+ IFSG DKVEVKALEKILEQKQRLQ+EM KYLSLRK
Sbjct: 445 IESVLCGSLFPVEFSISDIVKHWIGIFSGFDKVEVKALEKILEQKQRLQQEMQKYLSLRK 504

Query: 50  MHQDKDVPEVQKKIIF 3
           M QDKD+PEVQKKI+F
Sbjct: 505 MSQDKDIPEVQKKIVF 520


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1642

 Score =  233 bits (594), Expect = 1e-59
 Identities = 112/136 (82%), Positives = 122/136 (89%)
 Frame = -1

Query: 410 VAERLHDKSLLVKMYTLERLAEIYRVFCENSSDTDNPSEYDWIPGKILRCFYDKDFRSDT 231
           VAERL DKSLLVK Y +ERL E+YRV CE SSDT NP+E++WIPGKILRCFYDKDFRSD 
Sbjct: 385 VAERLRDKSLLVKKYAMERLTEVYRVACEKSSDTVNPNEFNWIPGKILRCFYDKDFRSDI 444

Query: 230 IESVLCGSLFPPEFSIKDMVKHWVEIFSGLDKVEVKALEKILEQKQRLQEEMHKYLSLRK 51
           IESVLCGSLFP EFSI D+VKHW+ IFSG DKVEVKALEKILEQKQRLQ+EM KYLSLRK
Sbjct: 445 IESVLCGSLFPVEFSISDIVKHWIGIFSGFDKVEVKALEKILEQKQRLQQEMQKYLSLRK 504

Query: 50  MHQDKDVPEVQKKIIF 3
           M QDKD+PEVQKKI+F
Sbjct: 505 MSQDKDIPEVQKKIVF 520


>ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
           truncatula] gi|124359430|gb|ABN05881.1| HEAT [Medicago
           truncatula] gi|355483356|gb|AES64559.1| Sister chromatid
           cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 1683

 Score =  229 bits (585), Expect = 1e-58
 Identities = 112/136 (82%), Positives = 121/136 (88%)
 Frame = -1

Query: 410 VAERLHDKSLLVKMYTLERLAEIYRVFCENSSDTDNPSEYDWIPGKILRCFYDKDFRSDT 231
           VAERLHDKS LVK YTLERL EIYRVFCE SSD  NP  YDWIPGKILRCF+DKDFRSDT
Sbjct: 388 VAERLHDKSQLVKKYTLERLIEIYRVFCEKSSDNVNPDGYDWIPGKILRCFHDKDFRSDT 447

Query: 230 IESVLCGSLFPPEFSIKDMVKHWVEIFSGLDKVEVKALEKILEQKQRLQEEMHKYLSLRK 51
           IESVLCGSLFP EF++ DMVKHWV+IFSGLD VEVKALEKILEQKQRLQEE+ KYL+LR+
Sbjct: 448 IESVLCGSLFPSEFAMNDMVKHWVDIFSGLDNVEVKALEKILEQKQRLQEELQKYLALRQ 507

Query: 50  MHQDKDVPEVQKKIIF 3
             QDK+ PEVQKKI+F
Sbjct: 508 NSQDKENPEVQKKIMF 523


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1648

 Score =  224 bits (571), Expect = 6e-57
 Identities = 109/136 (80%), Positives = 119/136 (87%)
 Frame = -1

Query: 410 VAERLHDKSLLVKMYTLERLAEIYRVFCENSSDTDNPSEYDWIPGKILRCFYDKDFRSDT 231
           VAERL DKSLLV+ +TLERLAEIYRVFCEN+S   NP EYDWIP KI+RCFYDKDFRSD 
Sbjct: 388 VAERLSDKSLLVRKHTLERLAEIYRVFCENNSIAVNPGEYDWIPRKIIRCFYDKDFRSDI 447

Query: 230 IESVLCGSLFPPEFSIKDMVKHWVEIFSGLDKVEVKALEKILEQKQRLQEEMHKYLSLRK 51
           IES+LCGSLFP EFSI D+VK WVEIFSG DKVEVKALEKILEQKQRLQEEM KYL LR+
Sbjct: 448 IESILCGSLFPSEFSINDIVKRWVEIFSGFDKVEVKALEKILEQKQRLQEEMQKYLVLRQ 507

Query: 50  MHQDKDVPEVQKKIIF 3
             Q+KD+PE QKKI+F
Sbjct: 508 TSQEKDIPEAQKKIVF 523


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1656

 Score =  224 bits (570), Expect = 7e-57
 Identities = 110/136 (80%), Positives = 121/136 (88%)
 Frame = -1

Query: 410 VAERLHDKSLLVKMYTLERLAEIYRVFCENSSDTDNPSEYDWIPGKILRCFYDKDFRSDT 231
           VAERL DKSLLV+ +TLERLAEIYRVFCENSS   NPSEYDWIP KI+RCFYDKDFRSD 
Sbjct: 388 VAERLCDKSLLVRKHTLERLAEIYRVFCENSSIAVNPSEYDWIPRKIIRCFYDKDFRSDI 447

Query: 230 IESVLCGSLFPPEFSIKDMVKHWVEIFSGLDKVEVKALEKILEQKQRLQEEMHKYLSLRK 51
           IES+LCGSLFP EFSI D+VK WVEIFSG DKVEVKALEKILE+KQRLQEEM KYL+LR+
Sbjct: 448 IESILCGSLFPSEFSINDIVKRWVEIFSGFDKVEVKALEKILEKKQRLQEEMQKYLALRQ 507

Query: 50  MHQDKDVPEVQKKIIF 3
           + Q+KD+PE QKKI F
Sbjct: 508 ISQEKDIPEAQKKIGF 523


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