BLASTX nr result

ID: Glycyrrhiza24_contig00020224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020224
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medic...   141   6e-32
ref|XP_003518276.1| PREDICTED: MATE efflux family protein DTX1-l...   128   6e-28
ref|XP_003603676.1| Multidrug and toxin extrusion protein [Medic...   116   2e-24
ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion pro...   112   4e-23
ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   109   3e-22

>ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355516734|gb|AES98357.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 560

 Score =  141 bits (355), Expect = 6e-32
 Identities = 81/138 (58%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = -2

Query: 470 GSARPTIGANINLGSFYFVGMPVAILLGFVAKMXXXXXXXXXXXXXASCAVLMLVVLCRT 291
           GSARPTIGANINLGSFY VGMPVAI LGFVAK+              SCA+LMLVVLCRT
Sbjct: 425 GSARPTIGANINLGSFYLVGMPVAIFLGFVAKLGFPGLWIGLLAAQGSCAMLMLVVLCRT 484

Query: 290 DWNVQVQRAKELXXXXXXXXXXXXXXXXXSCDVAANSKLPTFIEAN-NNNNAHACLEEIV 114
           DWN+QVQRAKEL                       ++KLP F+E N N NN H CLEEIV
Sbjct: 485 DWNLQVQRAKELTKSSTTSDD-------------VDAKLPIFMEGNVNKNNVHGCLEEIV 531

Query: 113 ITDDELITTKTSSLETDP 60
           IT D  + TK SSLETDP
Sbjct: 532 ITHD--VFTKKSSLETDP 547


>ref|XP_003518276.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 527

 Score =  128 bits (321), Expect = 6e-28
 Identities = 84/147 (57%), Positives = 87/147 (59%), Gaps = 10/147 (6%)
 Frame = -2

Query: 470 GSARPTIGANINLGSFYFVGMPVAILLGFVAKMXXXXXXXXXXXXXASCAVLMLVVLCRT 291
           GSARPTIGANINLGSFY VGMPVAILL FVAKM             ASCA LM  VLC T
Sbjct: 372 GSARPTIGANINLGSFYLVGMPVAILLSFVAKMGFPGLWLGLLAAQASCAGLMFYVLCTT 431

Query: 290 DWNVQVQRAKEL-XXXXXXXXXXXXXXXXXSCDVAANSK---LPTFI--EANNNNNAHAC 129
           DWNVQV+RAKEL                  SC  + N     LPT    EAN N NAH C
Sbjct: 432 DWNVQVERAKELTKSSTTTTTAMTATIATTSCSTSPNCNYKLLPTLTKKEANMNKNAHVC 491

Query: 128 LEEIVITD----DELITTKTSSLETDP 60
           LEEIVIT     DEL  TK SS+ETDP
Sbjct: 492 LEEIVITSGGGGDEL--TKISSVETDP 516


>ref|XP_003603676.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355492724|gb|AES73927.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 399

 Score =  116 bits (291), Expect = 2e-24
 Identities = 68/138 (49%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
 Frame = -2

Query: 470 GSARPTIGANINLGSFYFVGMPVAILLGFVAKMXXXXXXXXXXXXXASCAVLMLVVLCRT 291
           GSARPT+GANINLGSFY VGMPVAI+LGFV KM              SCA+LML VLC T
Sbjct: 267 GSARPTVGANINLGSFYLVGMPVAIVLGFVVKMGFVGLWFGLLAAQGSCAILMLYVLCTT 326

Query: 290 DWNVQVQRAKELXXXXXXXXXXXXXXXXXSCDVAANSKLPTFIEANNNNNAHACLEE-IV 114
           DWN Q++RAK L                     +      T +  +NNNN   CLEE IV
Sbjct: 327 DWNDQIERAKNLTKATTTIGFSD----------STTFITKTVLRHDNNNNKCGCLEEIIV 376

Query: 113 ITDDELITTKTSSLETDP 60
           IT D+   T T SLE+DP
Sbjct: 377 ITHDDATKTCTHSLESDP 394


>ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 548

 Score =  112 bits (279), Expect = 4e-23
 Identities = 72/141 (51%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = -2

Query: 470 GSARPTIGANINLGSFYFVGMPVAILLGFVAKMXXXXXXXXXXXXXASCAVLMLVVLCRT 291
           GSARPT+GANINLGSFY VGMPVA+LLGFV KM              SCA LM+ VLC T
Sbjct: 424 GSARPTVGANINLGSFYLVGMPVAVLLGFVGKMGFPGLWLGLLAAQGSCAALMIFVLCTT 483

Query: 290 DWNVQVQRAKELXXXXXXXXXXXXXXXXXSCDVAANSKLPTFIEANNNNNAHACLEEIVI 111
           DWN QVQRA EL                     +A SKLPT  E NN       L EI++
Sbjct: 484 DWNAQVQRANELTNAN-----------------SAPSKLPT-TECNN-----VRLPEILV 520

Query: 110 TDDE----LITTKTSSLETDP 60
            D E     I TKT SLETDP
Sbjct: 521 MDTEDHHDEIITKTPSLETDP 541


>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223550704|gb|EEF52190.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  109 bits (272), Expect = 3e-22
 Identities = 68/140 (48%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
 Frame = -2

Query: 470 GSARPTIGANINLGSFYFVGMPVAILLGFVAKMXXXXXXXXXXXXXASCAVLMLVVLCRT 291
           GSARPTIGANINLGSFY VGMPV +L+GFVAKM             ASCA+LML VLCRT
Sbjct: 393 GSARPTIGANINLGSFYLVGMPVGMLMGFVAKMGFAGLWLGLLAAQASCAILMLYVLCRT 452

Query: 290 DWNVQVQRAKELXXXXXXXXXXXXXXXXXSCDVAANSKLPTFIEAN---NNNNAHACLEE 120
           DW+VQ +RA++L                      +++  P  I  N      N  A LEE
Sbjct: 453 DWSVQAERARKLTQTSATNSASILP--------VSSATKPEGITNNTVMKIKNKKANLEE 504

Query: 119 IVITDDELITTKTSSLETDP 60
           I+  DDEL+  K++SLETDP
Sbjct: 505 ILSIDDELV--KSTSLETDP 522


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