BLASTX nr result

ID: Glycyrrhiza24_contig00020206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020206
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medic...   498   e-138
ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing pro...   494   e-137
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
emb|CBI24978.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ric...   381   e-103

>ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
            gi|355488550|gb|AES69753.1| F-box/WD-40 repeat-containing
            protein [Medicago truncatula]
          Length = 438

 Score =  498 bits (1281), Expect = e-138
 Identities = 245/314 (78%), Positives = 269/314 (85%)
 Frame = -2

Query: 1021 VSQCRMKMGMVVTGVGDKVIRLWSLDSYKCIEEYSIPDMFSLVDFDFDESKIVGLIGSRL 842
            +SQCRMKMG +VTGVGDKVIRLWSLD YKC+EEYSIPD  SLVDFDFDESKIVGLIGS  
Sbjct: 121  ISQCRMKMGTLVTGVGDKVIRLWSLDRYKCVEEYSIPDTLSLVDFDFDESKIVGLIGSHF 180

Query: 841  CIWRRNGKRSVFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSRRCSQIIRMHHA 662
            CIWRRNGKRSVFPSLEGKF+KGSCMRYFDPEA+VGCDDG+VRVFDMYSRRCSQIIRMH A
Sbjct: 181  CIWRRNGKRSVFPSLEGKFIKGSCMRYFDPEAMVGCDDGSVRVFDMYSRRCSQIIRMHSA 240

Query: 661  PITCLCLSEDQLILXXXXXXXXXXXXXXSVQQVATLRSSDVRGIRALCFNPSSQLVFAGS 482
            PITCLCLSEDQLIL              SVQ+VATLRSSD RGI+ LC  PSSQL+FAGS
Sbjct: 241  PITCLCLSEDQLILSGSTSGNITIADPSSVQKVATLRSSDFRGIKTLCLKPSSQLLFAGS 300

Query: 481  AVGYTYCXXXXXXXXXXXXRVSPNVVYSLQHLQNDKSTLAVGGIDGILRFVNQNDGNVVS 302
            AVGYTYC            RVSPNVV SLQH++NDKSTLAVGGIDGILRF+NQNDGN+VS
Sbjct: 301  AVGYTYCWDMRTRKLLWNTRVSPNVVSSLQHMRNDKSTLAVGGIDGILRFLNQNDGNIVS 360

Query: 301  SCIVEDKLLSTPSRSHSGTIRRRKGRRLPDDTYINIDRIPMSARPAITCLAVGMKKIVTT 122
            SCI ED+LLST  +SH G+I+RRKG+RLP+DTYINID IP ++RP+ITCLAVGMKK+VTT
Sbjct: 361  SCIAEDRLLST-YQSHPGSIQRRKGKRLPEDTYINIDAIPRNSRPSITCLAVGMKKVVTT 419

Query: 121  HNTTDIRLWKFRDN 80
            HNT DIRLWKF+DN
Sbjct: 420  HNTRDIRLWKFKDN 433


>ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
            [Glycine max]
          Length = 444

 Score =  494 bits (1271), Expect = e-137
 Identities = 246/312 (78%), Positives = 269/312 (86%)
 Frame = -2

Query: 1021 VSQCRMKMGMVVTGVGDKVIRLWSLDSYKCIEEYSIPDMFSLVDFDFDESKIVGLIGSRL 842
            V+QCRMKMGM+VTGVG KVIRLWSLDSYKCIEEYS+PDMFSLVDFDFDESKIVGLIGS L
Sbjct: 129  VAQCRMKMGMLVTGVGHKVIRLWSLDSYKCIEEYSMPDMFSLVDFDFDESKIVGLIGSHL 188

Query: 841  CIWRRNGKRSVFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSRRCSQIIRMHHA 662
            CIWRRNGKRS+FPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSR+CSQIIRMH+A
Sbjct: 189  CIWRRNGKRSIFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSRKCSQIIRMHYA 248

Query: 661  PITCLCLSEDQLILXXXXXXXXXXXXXXSVQQVATLRSSDVRGIRALCFNPSSQLVFAGS 482
            PITCLCLSEDQLI+              SVQQVATLRSSD RGIR LCFNPSSQL+FAGS
Sbjct: 249  PITCLCLSEDQLIMSGSTSGSITMSDPSSVQQVATLRSSDARGIRTLCFNPSSQLLFAGS 308

Query: 481  AVGYTYCXXXXXXXXXXXXRVSPNVVYSLQHLQNDKSTLAVGGIDGILRFVNQNDGNVVS 302
            AVGY YC            RVSPNV+YSLQH+ +D STLAVGGIDGILR +NQNDG+VVS
Sbjct: 309  AVGYAYCWDLRTRKLLWSNRVSPNVIYSLQHMHSDTSTLAVGGIDGILRLLNQNDGSVVS 368

Query: 301  SCIVEDKLLSTPSRSHSGTIRRRKGRRLPDDTYINIDRIPMSARPAITCLAVGMKKIVTT 122
            SC++ DKLLST  +S SG+I+RRKG RLP++ YINID IP +ARP+ITCLAVGMKKIVTT
Sbjct: 369  SCVMGDKLLST-FQSPSGSIQRRKGSRLPENIYINIDLIPKTARPSITCLAVGMKKIVTT 427

Query: 121  HNTTDIRLWKFR 86
            HNT DIRLWKF+
Sbjct: 428  HNTNDIRLWKFK 439


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  385 bits (988), Expect = e-104
 Identities = 196/326 (60%), Positives = 237/326 (72%), Gaps = 13/326 (3%)
 Frame = -2

Query: 1021 VSQCRMKMGMVVTGVGDKVIRLWSLDSYKCIEEYSIPDMFSLVDFDFDESK--------- 869
            V QCRMK G+V+TGVGDKV+RLWSL+SYKCIEEYSIPD   LVDFDFDESK         
Sbjct: 117  VDQCRMKRGLVLTGVGDKVMRLWSLESYKCIEEYSIPDGVPLVDFDFDESKAVVPYIDIV 176

Query: 868  ----IVGLIGSRLCIWRRNGKRSVFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMY 701
                IVGL+G+R+CIWRRNG+RS+FPS EG+F+KGSCMRYFDPEAVVGC+DG  RVFDMY
Sbjct: 177  HRIVIVGLVGTRICIWRRNGQRSIFPSREGQFMKGSCMRYFDPEAVVGCEDGTARVFDMY 236

Query: 700  SRRCSQIIRMHHAPITCLCLSEDQLILXXXXXXXXXXXXXXSVQQVATLRSSDVRGIRAL 521
            S++CS+I+RMH  P+TCL LSEDQLI+              S Q+VATLR +D  GI++L
Sbjct: 237  SKKCSRIVRMHTEPVTCLSLSEDQLIISGSSLGRITISGLSSDQRVATLRPTDSTGIKSL 296

Query: 520  CFNPSSQLVFAGSAVGYTYCXXXXXXXXXXXXRVSPNVVYSLQHLQNDKSTLAVGGIDGI 341
            CFNP S  VFAG+  GY  C            RVSPNVVYSLQH+++D STL VGGIDG+
Sbjct: 297  CFNPVSHQVFAGTTAGYASCWDLRTMRQLWKTRVSPNVVYSLQHMRSDTSTLVVGGIDGV 356

Query: 340  LRFVNQNDGNVVSSCIVEDKLLSTPSRSHSGTIRRRKGRRLPDDTYINIDRIPMSARPAI 161
            LR ++QN G V+SS ++ D   ST S    G I R+ G+RLP D   NIDRIP + RP I
Sbjct: 357  LRVLDQNTGEVLSSYVM-DHGTSTSSGYTHGVIERKIGKRLPYD--YNIDRIPKTVRPPI 413

Query: 160  TCLAVGMKKIVTTHNTTDIRLWKFRD 83
            TCLAVGM+K++TTHN  +IR+WKF +
Sbjct: 414  TCLAVGMQKVITTHNIKNIRMWKFNN 439


>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  382 bits (982), Expect = e-104
 Identities = 183/309 (59%), Positives = 226/309 (73%)
 Frame = -2

Query: 1015 QCRMKMGMVVTGVGDKVIRLWSLDSYKCIEEYSIPDMFSLVDFDFDESKIVGLIGSRLCI 836
            QCRMKMG+++TGVGDK +RLWSL+SYKC+EE+ +P++  LVDFDFDE+KIVGLIG+R+C 
Sbjct: 121  QCRMKMGLILTGVGDKAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKIVGLIGTRICT 180

Query: 835  WRRNGKRSVFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSRRCSQIIRMHHAPI 656
            WRRNGKRS+FPS EG F+KG CMRY DPEAVVGC+DG  RVFDMYSR+CS+IIRMH  P+
Sbjct: 181  WRRNGKRSIFPSREGTFMKGLCMRYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGPV 240

Query: 655  TCLCLSEDQLILXXXXXXXXXXXXXXSVQQVATLRSSDVRGIRALCFNPSSQLVFAGSAV 476
             CL LS+DQ I+              S Q++A LRS+D  GIR LCFNP S LVF+GS  
Sbjct: 241  RCLALSDDQCIISGSSLGSITISGLSSDQRIAKLRSTDSTGIRTLCFNPRSHLVFSGSTA 300

Query: 475  GYTYCXXXXXXXXXXXXRVSPNVVYSLQHLQNDKSTLAVGGIDGILRFVNQNDGNVVSSC 296
            GY  C            R+SPNV+YS+QHL +D  TL  GGIDG+LR ++QN G VVS C
Sbjct: 301  GYASCWDLRTMRPLWENRISPNVIYSMQHLCSDTHTLVAGGIDGVLRILDQNTGKVVSGC 360

Query: 295  IVEDKLLSTPSRSHSGTIRRRKGRRLPDDTYINIDRIPMSARPAITCLAVGMKKIVTTHN 116
            +++D    T S+     I R+KGRR+ +DT   ID IP S+RP ITCLAVGM+K+VTTHN
Sbjct: 361  VMDDSPAPTSSQKTDSIIERKKGRRITEDTL--IDSIPKSSRPPITCLAVGMQKVVTTHN 418

Query: 115  TTDIRLWKF 89
               IR+WKF
Sbjct: 419  GKYIRMWKF 427


>ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223543025|gb|EEF44560.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 336

 Score =  381 bits (979), Expect = e-103
 Identities = 185/312 (59%), Positives = 233/312 (74%)
 Frame = -2

Query: 1021 VSQCRMKMGMVVTGVGDKVIRLWSLDSYKCIEEYSIPDMFSLVDFDFDESKIVGLIGSRL 842
            V QCRMKMG+++TGVGDK +RLWSL+SYKCIEEYSIP+  SLVDFDFDESKIVGLIG+++
Sbjct: 26   VDQCRMKMGLLLTGVGDKAMRLWSLESYKCIEEYSIPNACSLVDFDFDESKIVGLIGTQV 85

Query: 841  CIWRRNGKRSVFPSLEGKFVKGSCMRYFDPEAVVGCDDGAVRVFDMYSRRCSQIIRMHHA 662
            C+WRRNG  S FP   G ++KG CMRY DPEAVVGC+DG  R+FD+YS++CS+IIRMH  
Sbjct: 86   CLWRRNGPMSTFPPRGGTYMKGLCMRYLDPEAVVGCEDGTARIFDLYSKKCSKIIRMHPE 145

Query: 661  PITCLCLSEDQLILXXXXXXXXXXXXXXSVQQVATLRSSDVRGIRALCFNPSSQLVFAGS 482
            P+TCL L ++Q+IL              S Q +ATL+ +D  GI+ LCFNP S +VF+G+
Sbjct: 146  PVTCLSLGDEQIILGGSSLGRITVSDYSSDQCIATLKPTDSTGIKTLCFNPRSHMVFSGT 205

Query: 481  AVGYTYCXXXXXXXXXXXXRVSPNVVYSLQHLQNDKSTLAVGGIDGILRFVNQNDGNVVS 302
            A GYT C            RVSPNVVYSLQHL NDKS+L VGGIDG+LR ++QN G ++S
Sbjct: 206  AAGYTSCWDLRMMRRVWETRVSPNVVYSLQHLSNDKSSLVVGGIDGVLRILDQNSGIILS 265

Query: 301  SCIVEDKLLSTPSRSHSGTIRRRKGRRLPDDTYINIDRIPMSARPAITCLAVGMKKIVTT 122
            S +++    S+ S    GTI RRKG+ LP +T   ID+IP S+RP+ITCLAVGMKK+VTT
Sbjct: 266  SYVIDHDAGSSSSGYSHGTIERRKGKSLPSETI--IDQIPRSSRPSITCLAVGMKKVVTT 323

Query: 121  HNTTDIRLWKFR 86
            HN+  IR+WKF+
Sbjct: 324  HNSKYIRVWKFK 335


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