BLASTX nr result

ID: Glycyrrhiza24_contig00020202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020202
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   368   e-100
ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein lig...   367   2e-99
ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein lig...   342   6e-92
ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...   338   7e-91
ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medi...   336   5e-90

>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  368 bits (945), Expect = e-100
 Identities = 184/241 (76%), Positives = 194/241 (80%), Gaps = 6/241 (2%)
 Frame = -1

Query: 761 MNGEGNEALV------KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGC 600
           MNGEG+EA+       KE+LVYMWGYLPGALPQ            P S   W+DVCGGGC
Sbjct: 1   MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60

Query: 599 GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSAT 420
           GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGE PEPFPLPTE +IVKAAAGWAHCVS T
Sbjct: 61  GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120

Query: 419 DCGEVYTWGWKECIPSGKVFGEPLPGVSPEKDVPGRQSSFLTEQVSPHSQXXXXXXXXXX 240
           DCGEVYTWGW+EC+PSGKVFGE L GVSPEKDVPGRQSSFLTEQVSP SQ          
Sbjct: 121 DCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTAS 180

Query: 239 XXXGEDNTKRRRVSSVKQTAETSSSGDDILTALPCLVTLNPGVRITSVAAGGRHTLALSD 60
              GE+++KRRRVSS KQTAETSSS DD  TALPCLVTLNPGVRI SVAAGGRHTLALSD
Sbjct: 181 GTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSD 240

Query: 59  I 57
           I
Sbjct: 241 I 241


>ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  367 bits (942), Expect = 2e-99
 Identities = 184/237 (77%), Positives = 193/237 (81%), Gaps = 2/237 (0%)
 Frame = -1

Query: 761 MNGEGNEALV--KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGCGFAM 588
           MNGEG+EA+   KE LVYMWGYLPGALPQ            P S   W+DVCGGGCGFAM
Sbjct: 1   MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCGFAM 60

Query: 587 AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATDCGE 408
           AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTE +IVKAAAGWAHCVS TDCGE
Sbjct: 61  AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCGE 120

Query: 407 VYTWGWKECIPSGKVFGEPLPGVSPEKDVPGRQSSFLTEQVSPHSQXXXXXXXXXXXXXG 228
           VYTWGW+EC+PSGKVFGE L GVSPEKDVP RQSSFLTEQVSP SQ             G
Sbjct: 121 VYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASGTSG 180

Query: 227 EDNTKRRRVSSVKQTAETSSSGDDILTALPCLVTLNPGVRITSVAAGGRHTLALSDI 57
           E+++KRRRVSS KQTAETSSS DD  TALPCLVTLNPGVRI SVAAGGRHTLALSDI
Sbjct: 181 EESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDI 237


>ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  342 bits (877), Expect = 6e-92
 Identities = 175/237 (73%), Positives = 186/237 (78%), Gaps = 2/237 (0%)
 Frame = -1

Query: 761 MNGEGNEALV--KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGCGFAM 588
           MNGEG+EA+   KE LVYMWGYLPGALPQ            P S   W+DVCGGGCGFAM
Sbjct: 1   MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCGFAM 60

Query: 587 AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATDCGE 408
           AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTE +IVKAAAGWAHCVS TDCGE
Sbjct: 61  AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCGE 120

Query: 407 VYTWGWKECIPSGKVFGEPLPGVSPEKDVPGRQSSFLTEQVSPHSQXXXXXXXXXXXXXG 228
           VYTWGW+EC+PSGKVFGE L GVSPEKDVP RQSS  T   +  +              G
Sbjct: 121 VYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSKSTGGTASGTS-------------G 167

Query: 227 EDNTKRRRVSSVKQTAETSSSGDDILTALPCLVTLNPGVRITSVAAGGRHTLALSDI 57
           E+++KRRRVSS KQTAETSSS DD  TALPCLVTLNPGVRI SVAAGGRHTLALSDI
Sbjct: 168 EESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDI 224


>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
           gi|223536498|gb|EEF38145.1| Serine/threonine-protein
           kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  338 bits (868), Expect = 7e-91
 Identities = 171/240 (71%), Positives = 187/240 (77%), Gaps = 5/240 (2%)
 Frame = -1

Query: 761 MNGEGNEAL-----VKEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGCG 597
           MNGEG E +     VKEKLV+MWGYLPGALPQ             A    W+DVCGGGCG
Sbjct: 1   MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR--ADGYSWKDVCGGGCG 58

Query: 596 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATD 417
           FAMAISE GKLITWGSTDDLGQSYVTSGKHGE PEPFPLPTEASI+KAAAGWAHC++ATD
Sbjct: 59  FAMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATD 118

Query: 416 CGEVYTWGWKECIPSGKVFGEPLPGVSPEKDVPGRQSSFLTEQVSPHSQXXXXXXXXXXX 237
            GEVYTWGWKECIPSGKVFG+P      EKDV  R S FLTEQVSP SQ           
Sbjct: 119 TGEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTGGIDGR 178

Query: 236 XXGEDNTKRRRVSSVKQTAETSSSGDDILTALPCLVTLNPGVRITSVAAGGRHTLALSDI 57
             G+++TKRRR+SS KQ+AE+SSSGD+ L+ALPCLVTLNPGVRIT+VAAGGRHTLALSDI
Sbjct: 179 GSGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDI 238


>ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355489804|gb|AES71007.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 464

 Score =  336 bits (861), Expect = 5e-90
 Identities = 173/237 (72%), Positives = 187/237 (78%), Gaps = 2/237 (0%)
 Frame = -1

Query: 761 MNGEGNEALVKEKLVYMWGYLPGALPQXXXXXXXXXXXXPASC--CDWRDVCGGGCGFAM 588
           MNG G E  VKEK+VYMWGYLPGALPQ            PA+    +W+DV GGGCGFAM
Sbjct: 1   MNGGGCE--VKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAM 58

Query: 587 AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATDCGE 408
           AISE GKLITWGSTDDLGQSYVTSGKHGETPEPF LP E SIVKAA+ WAHCV+ATDCGE
Sbjct: 59  AISESGKLITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGE 118

Query: 407 VYTWGWKECIPSGKVFGEPLPGVSPEKDVPGRQSSFLTEQVSPHSQXXXXXXXXXXXXXG 228
           VYTWGWKECIPSGKVFGE   GVSPEKD  G+ SSFLTEQVS  SQ             G
Sbjct: 119 VYTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQ--VSKSTGGTVSSG 176

Query: 227 EDNTKRRRVSSVKQTAETSSSGDDILTALPCLVTLNPGVRITSVAAGGRHTLALSDI 57
           E+++KRR+VSS KQ A+TSSSGDDILTA+PCLVTLNPGV+ITSVAAGGRHTL LSDI
Sbjct: 177 EESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDI 233


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