BLASTX nr result

ID: Glycyrrhiza24_contig00020201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020201
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petr...   137   1e-30
gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouc...   136   2e-30

>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/76 (90%), Positives = 74/76 (97%)
 Frame = -1

Query: 228 PNAITYSTIISVWEKAGKLDRAAVLFQKLRSSGVQIDPVLYQTMIAAYERAGLVAHAKRL 49
           PNAITYSTIIS+WEKAGKLDRAA+LFQKLRSSGV+ID VLYQTMI AYERAGLVAHAKRL
Sbjct: 413 PNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRL 472

Query: 48  LHELKQPDNIPRETAI 1
           LHELK+PDNIPR+TAI
Sbjct: 473 LHELKRPDNIPRDTAI 488


>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/76 (89%), Positives = 74/76 (97%)
 Frame = -1

Query: 228 PNAITYSTIISVWEKAGKLDRAAVLFQKLRSSGVQIDPVLYQTMIAAYERAGLVAHAKRL 49
           PNAITYSTIIS+W+KAGKLDRAA+LFQKLRSSG++ID VLYQTMI AYERAGLVAHAKRL
Sbjct: 433 PNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRL 492

Query: 48  LHELKQPDNIPRETAI 1
           LHELK+PDNIPRETAI
Sbjct: 493 LHELKRPDNIPRETAI 508


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/76 (89%), Positives = 73/76 (96%)
 Frame = -1

Query: 228 PNAITYSTIISVWEKAGKLDRAAVLFQKLRSSGVQIDPVLYQTMIAAYERAGLVAHAKRL 49
           PNAITYSTIIS+WEKAGKLDRAA+LFQKLRSSGV+ID VLYQTMI AYER GLVAHAKRL
Sbjct: 422 PNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRL 481

Query: 48  LHELKQPDNIPRETAI 1
           LHELK+PDNIPR+TAI
Sbjct: 482 LHELKRPDNIPRDTAI 497


>gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 426

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = -1

Query: 228 PNAITYSTIISVWEKAGKLDRAAVLFQKLRSSGVQIDPVLYQTMIAAYERAGLVAHAKRL 49
           PNAITYSTIIS+W K GKLDRAA+LFQKLRSSGV+ID VLYQTMI AYERAGLVAHAKRL
Sbjct: 252 PNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRL 311

Query: 48  LHELKQPDNIPRETAI 1
           LHELK+PDNIPR+TAI
Sbjct: 312 LHELKRPDNIPRDTAI 327


>gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 426

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = -1

Query: 228 PNAITYSTIISVWEKAGKLDRAAVLFQKLRSSGVQIDPVLYQTMIAAYERAGLVAHAKRL 49
           PNAITYSTIIS+W K GKLDRAA+LFQKLRSSGV+ID VLYQTMI AYERAGLVAHAKRL
Sbjct: 252 PNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRL 311

Query: 48  LHELKQPDNIPRETAI 1
           LHELK+PDNIPR+TAI
Sbjct: 312 LHELKRPDNIPRDTAI 327


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