BLASTX nr result

ID: Glycyrrhiza24_contig00020198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020198
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510442.1| glycosyltransferase, putative [Ricinus commu...    64   1e-08
ref|XP_004158776.1| PREDICTED: uncharacterized LOC101206589 [Cuc...    57   2e-06
ref|XP_004135847.1| PREDICTED: uncharacterized protein LOC101206...    57   2e-06
ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidas...    57   2e-06
gb|ACU24642.1| unknown [Glycine max]                                   57   2e-06

>ref|XP_002510442.1| glycosyltransferase, putative [Ricinus communis]
           gi|223551143|gb|EEF52629.1| glycosyltransferase,
           putative [Ricinus communis]
          Length = 477

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 15/92 (16%)
 Frame = +3

Query: 48  AAWITMPKNRWXXXXXXXXXXXXXXXXXIRTTSDSCNNSNAVTQHLGS------------ 191
           +AWIT  KNRW                 IR+ SDSC++S+ +T    +            
Sbjct: 6   SAWITKHKNRWPLMILAFFTLSTLIVFSIRSASDSCHSSSNITTTATTANVDRFGEPKVD 65

Query: 192 SEPEVRS---PSPLEFMKSKLVLMVSHELSLS 278
           S+P++ S   P+PL+FMKSKLVL+VSHELSLS
Sbjct: 66  SKPQIHSSVAPNPLDFMKSKLVLLVSHELSLS 97


>ref|XP_004158776.1| PREDICTED: uncharacterized LOC101206589 [Cucumis sativus]
          Length = 278

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
 Frame = +3

Query: 57  ITMPKNRWXXXXXXXXXXXXXXXXXIRTTSDSC--NNSNAVTQHLG------SSEPEVRS 212
           +TM K RW                 +RTT DSC  N++    +  G      S + E ++
Sbjct: 9   VTMSKKRWPLMILALVSISTAMVFFMRTTFDSCTGNDNRRFVEEKGIGSKILSPQNERKA 68

Query: 213 PSPLEFMKSKLVLMVSHELSLS 278
           P+PL+FMKSKLVL+VSHELSLS
Sbjct: 69  PNPLDFMKSKLVLLVSHELSLS 90


>ref|XP_004135847.1| PREDICTED: uncharacterized protein LOC101206589 [Cucumis sativus]
          Length = 472

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
 Frame = +3

Query: 57  ITMPKNRWXXXXXXXXXXXXXXXXXIRTTSDSC--NNSNAVTQHLG------SSEPEVRS 212
           +TM K RW                 +RTT DSC  N++    +  G      S + E ++
Sbjct: 9   VTMSKKRWPLMILALVSISTAMVFFMRTTFDSCTGNDNRRFVEEKGIGSKILSPQNERKA 68

Query: 213 PSPLEFMKSKLVLMVSHELSLS 278
           P+PL+FMKSKLVL+VSHELSLS
Sbjct: 69  PNPLDFMKSKLVLLVSHELSLS 90


>ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max]
          Length = 833

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +3

Query: 39  HSQAAWITMPKNRWXXXXXXXXXXXXXXXXXIRTTSDSCNNSNAVTQHLGSSEPEVRS-- 212
           HSQA W+ M                      +RTTSDSC       ++L + +P   S  
Sbjct: 4   HSQA-WLAMRSKTCALTLLALLSLSTLTLLFLRTTSDSCTQPQV--RNLDALQPRTDSKL 60

Query: 213 PSPLEFMKSKLVLMVSHELSLS 278
           P+PLEFMKSKLVLMVSHELSLS
Sbjct: 61  PNPLEFMKSKLVLMVSHELSLS 82


>gb|ACU24642.1| unknown [Glycine max]
          Length = 463

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +3

Query: 39  HSQAAWITMPKNRWXXXXXXXXXXXXXXXXXIRTTSDSCNNSNAVTQHLGSSEPEVRS-- 212
           HSQA W+ M                      +RTTSDSC       ++L + +P   S  
Sbjct: 4   HSQA-WLAMRSKTCALTLLALLSLSTLTLLFLRTTSDSCTQPQV--RNLDALQPRTDSKL 60

Query: 213 PSPLEFMKSKLVLMVSHELSLS 278
           P+PLEFMKSKLVLMVSHELSLS
Sbjct: 61  PNPLEFMKSKLVLMVSHELSLS 82


Top