BLASTX nr result

ID: Glycyrrhiza24_contig00020185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020185
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540461.1| PREDICTED: dynein light chain, cytoplasmic-l...   181   1e-43
ref|XP_002317506.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
ref|XP_002329139.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-33
ref|XP_002282291.1| PREDICTED: dynein light chain, cytoplasmic-l...   145   8e-33
emb|CBI20313.3| unnamed protein product [Vitis vinifera]              145   8e-33

>ref|XP_003540461.1| PREDICTED: dynein light chain, cytoplasmic-like [Glycine max]
          Length = 152

 Score =  181 bits (460), Expect = 1e-43
 Identities = 95/122 (77%), Positives = 102/122 (83%), Gaps = 2/122 (1%)
 Frame = -3

Query: 620 MQSIKHDPSEEAIMRLASLAISFNVRLRSSDMPLHMQEHALRYTRSLLISPLH--PSPKH 447
           M +  +    + IMRLASLAIS NVRL+SSDMP HMQEHALR+TRSL   PLH  PSPK 
Sbjct: 29  MHTTPNPNPSQTIMRLASLAISSNVRLKSSDMPSHMQEHALRHTRSLF--PLHHPPSPKP 86

Query: 446 INTHLARALKKEFDSAYGLAWHCVAGKSFGSFVSHTGGGFVYFSIDSLSVLLFKTEVHLV 267
            NT +ARALKKEFDS YGLAWHCV GKSFGSFVSHTGGGF+YFSIDSLSVLLFKTEVHLV
Sbjct: 87  SNTLIARALKKEFDSKYGLAWHCVIGKSFGSFVSHTGGGFIYFSIDSLSVLLFKTEVHLV 146

Query: 266 TQ 261
           TQ
Sbjct: 147 TQ 148


>ref|XP_002317506.1| predicted protein [Populus trichocarpa] gi|222860571|gb|EEE98118.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  154 bits (388), Expect = 2e-35
 Identities = 79/116 (68%), Positives = 93/116 (80%), Gaps = 3/116 (2%)
 Frame = -3

Query: 599 PSEEAIMRLASLAISFNVRLRSSDMPLHMQEHALRYTRSLLI---SPLHPSPKHINTHLA 429
           P+EE  ++LA++A+S NVRLRSSDMP+ MQE ALRY RS L    S   P P+   T LA
Sbjct: 7   PTEEFRIKLAAIALSLNVRLRSSDMPVDMQERALRYARSFLDKSPSSAAPKPRPNLTLLA 66

Query: 428 RALKKEFDSAYGLAWHCVAGKSFGSFVSHTGGGFVYFSIDSLSVLLFKTEVHLVTQ 261
           RALKKEFDSAYG+AWHCV GKSFGSFV+H+ GGF+YFSIDSL +LLFKTEV LVT+
Sbjct: 67  RALKKEFDSAYGVAWHCVVGKSFGSFVTHSQGGFIYFSIDSLFILLFKTEVQLVTE 122


>ref|XP_002329139.1| predicted protein [Populus trichocarpa] gi|222869808|gb|EEF06939.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  147 bits (370), Expect = 3e-33
 Identities = 75/110 (68%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
 Frame = -3

Query: 581 MRLASLAISFNVRLRSSDMPLHMQEHALRYTRSLLISP-LHPSPKHIN--THLARALKKE 411
           M+LA++A+S NVRLRSSDMP+ MQE ALRY RS L  P +  +PKH    T LARALKKE
Sbjct: 1   MKLAAIALSLNVRLRSSDMPVDMQERALRYARSFLDDPSISSAPKHRPNPTLLARALKKE 60

Query: 410 FDSAYGLAWHCVAGKSFGSFVSHTGGGFVYFSIDSLSVLLFKTEVHLVTQ 261
           FDS YG+AWHCVAG SFGSFV+H+ GGF+YFSIDSL ++LFKTEV +VT+
Sbjct: 61  FDSVYGVAWHCVAGNSFGSFVTHSPGGFMYFSIDSLFIVLFKTEVKMVTE 110


>ref|XP_002282291.1| PREDICTED: dynein light chain, cytoplasmic-like [Vitis vinifera]
          Length = 135

 Score =  145 bits (366), Expect = 8e-33
 Identities = 76/110 (69%), Positives = 89/110 (80%), Gaps = 3/110 (2%)
 Frame = -3

Query: 581 MRLASLAISFNVRLRSSDMPLHMQEHALRYTRSLLIS---PLHPSPKHINTHLARALKKE 411
           ++LA++AIS NVRLRSSDMP  MQ+HALRY+RSL+ +      P+P HI    ARALKKE
Sbjct: 27  VKLAAIAISLNVRLRSSDMPPAMQDHALRYSRSLVDAIPDATRPNPSHI----ARALKKE 82

Query: 410 FDSAYGLAWHCVAGKSFGSFVSHTGGGFVYFSIDSLSVLLFKTEVHLVTQ 261
           FDS YG AWHCVAG SFGSFV+H+ GGFVYFSIDSL +LLFKTEV LVT+
Sbjct: 83  FDSVYGPAWHCVAGTSFGSFVTHSPGGFVYFSIDSLYILLFKTEVKLVTE 132


>emb|CBI20313.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  145 bits (366), Expect = 8e-33
 Identities = 76/110 (69%), Positives = 89/110 (80%), Gaps = 3/110 (2%)
 Frame = -3

Query: 581 MRLASLAISFNVRLRSSDMPLHMQEHALRYTRSLLIS---PLHPSPKHINTHLARALKKE 411
           ++LA++AIS NVRLRSSDMP  MQ+HALRY+RSL+ +      P+P HI    ARALKKE
Sbjct: 96  VKLAAIAISLNVRLRSSDMPPAMQDHALRYSRSLVDAIPDATRPNPSHI----ARALKKE 151

Query: 410 FDSAYGLAWHCVAGKSFGSFVSHTGGGFVYFSIDSLSVLLFKTEVHLVTQ 261
           FDS YG AWHCVAG SFGSFV+H+ GGFVYFSIDSL +LLFKTEV LVT+
Sbjct: 152 FDSVYGPAWHCVAGTSFGSFVTHSPGGFVYFSIDSLYILLFKTEVKLVTE 201


Top