BLASTX nr result

ID: Glycyrrhiza24_contig00020183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020183
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   192   4e-47
ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   192   4e-47
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   174   1e-41
ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   160   1e-37

>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  192 bits (487), Expect = 4e-47
 Identities = 91/196 (46%), Positives = 133/196 (67%), Gaps = 2/196 (1%)
 Frame = -1

Query: 582 ETLMASVITSQNAXXXXXXXXXXXSFHCVASSSKTVD-VSLIVPKTEHTEFV-IDDKEAV 409
           ETLM SVI SQ                 +  S   ++ + +++P ++    V I D EA 
Sbjct: 50  ETLMGSVIVSQ--------------MKSIGPSPMMIEGIPVVLPISDQPMRVEIIDLEAG 95

Query: 408 KASLIICEICAEPKRNDEMFRSQRCDHSFCSDCVTKQVATKIQESITVVSCPGLNCRGVL 229
           ++SL  CEICAE K ND+MF+++ C HSFC+DC+++ VATK+Q++I +V+CPGL+CR VL
Sbjct: 96  ESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVL 155

Query: 228 ELDACRPMLPKDLIERWDDALCEALLLSAPKFYCPFRDCSAMMLLDXXXXXXXXXXXECP 49
           E+D CRP+L + +I+RW++ALCE ++ ++ +FYCPF+DCSA+++ D           ECP
Sbjct: 156 EMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLVDD--NEGETIRESECP 213

Query: 48  FCHRLFCARCHVPWHP 1
           FCHRLFCA+C VPWHP
Sbjct: 214 FCHRLFCAQCSVPWHP 229


>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  192 bits (487), Expect = 4e-47
 Identities = 91/196 (46%), Positives = 133/196 (67%), Gaps = 2/196 (1%)
 Frame = -1

Query: 582 ETLMASVITSQNAXXXXXXXXXXXSFHCVASSSKTVD-VSLIVPKTEHTEFV-IDDKEAV 409
           ETLM SVI SQ                 +  S   ++ + +++P ++    V I D EA 
Sbjct: 50  ETLMGSVIVSQ--------------MKSIGPSPMMIEGIPVVLPISDQPMRVEIIDLEAG 95

Query: 408 KASLIICEICAEPKRNDEMFRSQRCDHSFCSDCVTKQVATKIQESITVVSCPGLNCRGVL 229
           ++SL  CEICAE K ND+MF+++ C HSFC+DC+++ VATK+Q++I +V+CPGL+CR VL
Sbjct: 96  ESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVL 155

Query: 228 ELDACRPMLPKDLIERWDDALCEALLLSAPKFYCPFRDCSAMMLLDXXXXXXXXXXXECP 49
           E+D CRP+L + +I+RW++ALCE ++ ++ +FYCPF+DCSA+++ D           ECP
Sbjct: 156 EMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLVDD--NEGETIRESECP 213

Query: 48  FCHRLFCARCHVPWHP 1
           FCHRLFCA+C VPWHP
Sbjct: 214 FCHRLFCAQCSVPWHP 229


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  174 bits (440), Expect = 1e-41
 Identities = 88/193 (45%), Positives = 113/193 (58%)
 Frame = -1

Query: 582 ETLMASVITSQNAXXXXXXXXXXXSFHCVASSSKTVDVSLIVPKTEHTEFVIDDKEAVKA 403
           E LM SV+ SQ                   SS   ++   +VP +          E  ++
Sbjct: 49  EALMGSVMISQMKNSITTATIINTCKISNPSSLLMIEPPPVVPNSP--------TETGQS 100

Query: 402 SLIICEICAEPKRNDEMFRSQRCDHSFCSDCVTKQVATKIQESITVVSCPGLNCRGVLEL 223
           S I CEIC E K  D+MF +  C HSFC DCV K V TKIQES T+V+CPG+NCR VLEL
Sbjct: 101 SQIFCEICVEKKETDQMFATDSCIHSFCLDCVGKYVGTKIQESQTIVTCPGMNCRAVLEL 160

Query: 222 DACRPMLPKDLIERWDDALCEALLLSAPKFYCPFRDCSAMMLLDXXXXXXXXXXXECPFC 43
           D CR  L K +I+ W++ALC+ ++ +   FYCPFRDCSA+++ D           ECPFC
Sbjct: 161 DICRTKLAKGVIDSWEEALCKEMISTLQSFYCPFRDCSALLVND--NEGEVIRESECPFC 218

Query: 42  HRLFCARCHVPWH 4
           HRLFCA+C+VPWH
Sbjct: 219 HRLFCAQCYVPWH 231


>ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|222841400|gb|EEE78947.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  173 bits (439), Expect = 2e-41
 Identities = 74/142 (52%), Positives = 104/142 (73%)
 Frame = -1

Query: 429 IDDKEAVKASLIICEICAEPKRNDEMFRSQRCDHSFCSDCVTKQVATKIQESITVVSCPG 250
           I+   AV++SL  C+ICAE K+ND+MF+++ C HSFC+DC+++ VA K+Q+   +V+CPG
Sbjct: 91  INQSGAVESSLRFCDICAERKQNDQMFKTESCVHSFCNDCISRYVAAKVQDGTRIVTCPG 150

Query: 249 LNCRGVLELDACRPMLPKDLIERWDDALCEALLLSAPKFYCPFRDCSAMMLLDXXXXXXX 70
           LNCR VL+L  CRP+L   +I+ W+DALCE ++  + +FYCPF+DCSA+++ D       
Sbjct: 151 LNCRAVLDLVTCRPILTSVVIDLWEDALCEEVINVSQRFYCPFKDCSALLIDD--NEGEA 208

Query: 69  XXXXECPFCHRLFCARCHVPWH 4
               ECPFCHRLFCA C VPWH
Sbjct: 209 IIESECPFCHRLFCALCSVPWH 230


>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
           vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
           product [Vitis vinifera]
          Length = 301

 Score =  160 bits (406), Expect = 1e-37
 Identities = 68/129 (52%), Positives = 96/129 (74%)
 Frame = -1

Query: 390 CEICAEPKRNDEMFRSQRCDHSFCSDCVTKQVATKIQESITVVSCPGLNCRGVLELDACR 211
           CEICAE +  DEMFRS +C H+FCS C++K VA KIQES+ +V+CP L+C GVLE+D CR
Sbjct: 98  CEICAERRGLDEMFRSGKCCHTFCSYCISKHVAVKIQESVRMVTCPALSCEGVLEVDDCR 157

Query: 210 PMLPKDLIERWDDALCEALLLSAPKFYCPFRDCSAMMLLDXXXXXXXXXXXECPFCHRLF 31
            ++ ++++E+W++  CE+++ ++ +FYCPFRDCSAM++ D           ECP C RLF
Sbjct: 158 GIVAREVMEKWEEVSCESIIAASQRFYCPFRDCSAMLVDD--NGGEVIRESECPVCRRLF 215

Query: 30  CARCHVPWH 4
           CA C+VPWH
Sbjct: 216 CAACYVPWH 224


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