BLASTX nr result

ID: Glycyrrhiza24_contig00020177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020177
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   402   e-110
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              388   e-106
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   388   e-106
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   386   e-105
ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score =  402 bits (1033), Expect = e-110
 Identities = 198/202 (98%), Positives = 200/202 (99%)
 Frame = -2

Query: 606  RQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGAFLS 427
            RQRRGRAGRVQPGECYHLYPKCVY+AFSEYQLPELLRTPLNSLCLQIKSLQVESIG FLS
Sbjct: 652  RQRRGRAGRVQPGECYHLYPKCVYDAFSEYQLPELLRTPLNSLCLQIKSLQVESIGGFLS 711

Query: 426  AALQAPEPRTVQNAIDFLKMIGALDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFD 247
            AALQAPEPR VQNAIDFLKMIGALDE+ENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFD
Sbjct: 712  AALQAPEPRAVQNAIDFLKMIGALDEQENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFD 771

Query: 246  PVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 67
            PVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY
Sbjct: 772  PVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 831

Query: 66   EYCWRNFLSAQTLQAIHSLRKQ 1
            EYCWRNFLSAQTLQAIHSLRKQ
Sbjct: 832  EYCWRNFLSAQTLQAIHSLRKQ 853


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  388 bits (996), Expect = e-106
 Identities = 189/202 (93%), Positives = 195/202 (96%)
 Frame = -2

Query: 606  RQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGAFLS 427
            RQRRGRAGRVQPGECYHLYP CVYEAFSEYQLPELLRTPLNSLCLQIKSLQV SIG FLS
Sbjct: 627  RQRRGRAGRVQPGECYHLYPSCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLS 686

Query: 426  AALQAPEPRTVQNAIDFLKMIGALDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFD 247
            AALQ PEP  VQNA+DFLKMIGALDEKENLTNLG++LSMLPVDPKLGKMLIMG IFRCFD
Sbjct: 687  AALQPPEPLAVQNAVDFLKMIGALDEKENLTNLGEYLSMLPVDPKLGKMLIMGTIFRCFD 746

Query: 246  PVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 67
            P+LTIVAGLSV+DPFLLPQDK+DLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY
Sbjct: 747  PILTIVAGLSVKDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 806

Query: 66   EYCWRNFLSAQTLQAIHSLRKQ 1
            EYCWRNFLSAQTLQAIHSLRKQ
Sbjct: 807  EYCWRNFLSAQTLQAIHSLRKQ 828


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera]
          Length = 1136

 Score =  388 bits (996), Expect = e-106
 Identities = 189/202 (93%), Positives = 195/202 (96%)
 Frame = -2

Query: 606  RQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGAFLS 427
            RQRRGRAGRVQPGECYHLYP CVYEAFSEYQLPELLRTPLNSLCLQIKSLQV SIG FLS
Sbjct: 627  RQRRGRAGRVQPGECYHLYPSCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLS 686

Query: 426  AALQAPEPRTVQNAIDFLKMIGALDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFD 247
            AALQ PEP  VQNA+DFLKMIGALDEKENLTNLG++LSMLPVDPKLGKMLIMG IFRCFD
Sbjct: 687  AALQPPEPLAVQNAVDFLKMIGALDEKENLTNLGEYLSMLPVDPKLGKMLIMGTIFRCFD 746

Query: 246  PVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 67
            P+LTIVAGLSV+DPFLLPQDK+DLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY
Sbjct: 747  PILTIVAGLSVKDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 806

Query: 66   EYCWRNFLSAQTLQAIHSLRKQ 1
            EYCWRNFLSAQTLQAIHSLRKQ
Sbjct: 807  EYCWRNFLSAQTLQAIHSLRKQ 828


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1129

 Score =  386 bits (992), Expect = e-105
 Identities = 190/201 (94%), Positives = 195/201 (97%)
 Frame = -2

Query: 603  QRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGAFLSA 424
            QRRGRAGRVQPGECYHLYPKCVYEAF+EYQLPELLRTPLNSLCLQIKSLQVESI  FLSA
Sbjct: 622  QRRGRAGRVQPGECYHLYPKCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSA 681

Query: 423  ALQAPEPRTVQNAIDFLKMIGALDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFDP 244
            ALQ PEP  VQNAI FLKMIGALDEKENLTNLGKFLS+LPVDPKLGKMLIMGAIFRCFDP
Sbjct: 682  ALQPPEPLAVQNAIGFLKMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDP 741

Query: 243  VLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYE 64
            VLTIV+GLSVRDPFLLPQ+K+DLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYE
Sbjct: 742  VLTIVSGLSVRDPFLLPQEKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYE 801

Query: 63   YCWRNFLSAQTLQAIHSLRKQ 1
            YCWRNFLSAQTLQAIHSLRKQ
Sbjct: 802  YCWRNFLSAQTLQAIHSLRKQ 822


>ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1|
            predicted protein [Populus trichocarpa]
          Length = 1077

 Score =  380 bits (975), Expect = e-103
 Identities = 186/202 (92%), Positives = 194/202 (96%)
 Frame = -2

Query: 606  RQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGAFLS 427
            RQR+GRAGRVQPGECYHLYP+CVYEAF+EYQLPELLRTPLNSLCLQIKSLQV SIG FLS
Sbjct: 568  RQRKGRAGRVQPGECYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLS 627

Query: 426  AALQAPEPRTVQNAIDFLKMIGALDEKENLTNLGKFLSMLPVDPKLGKMLIMGAIFRCFD 247
            AALQ PE   VQNAI FLKMIGALDEKENLTNLGK+L+MLPVDPKLGKMLIMGAIF CFD
Sbjct: 628  AALQPPESLAVQNAIGFLKMIGALDEKENLTNLGKYLTMLPVDPKLGKMLIMGAIFHCFD 687

Query: 246  PVLTIVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAY 67
            PVLTIV+GLSVRDPFLLPQDK+DLAGTAKSRFSAKDYSDHMALVRAYEGWK+AEREGSAY
Sbjct: 688  PVLTIVSGLSVRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKEAEREGSAY 747

Query: 66   EYCWRNFLSAQTLQAIHSLRKQ 1
            EYCWRNFLSAQTLQAIHSLRKQ
Sbjct: 748  EYCWRNFLSAQTLQAIHSLRKQ 769


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