BLASTX nr result

ID: Glycyrrhiza24_contig00020157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020157
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago tru...   449   e-124
ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2,...   437   e-120
gb|AFK35529.1| unknown [Lotus japonicus]                              436   e-120
ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,...   436   e-120
ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago tru...   431   e-119

>ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago truncatula]
           gi|355489094|gb|AES70297.1| Tryptophan synthase beta
           chain [Medicago truncatula]
          Length = 412

 Score =  449 bits (1155), Expect = e-124
 Identities = 223/241 (92%), Positives = 231/241 (95%)
 Frame = -2

Query: 724 MEGRNDHHTGSVLSQRPDSFGRFGRFGGKYVPETLIHALTQLEAAFHSLASDEDFQRELD 545
           ME  N++ TGSV SQRPDSFGRFGRFGGKYVPETLIHALT+LEAAFHSLASDEDFQ+EL 
Sbjct: 1   MENHNNNDTGSVQSQRPDSFGRFGRFGGKYVPETLIHALTELEAAFHSLASDEDFQKELA 60

Query: 544 GVLRDYVGRESPLYFAERLTEHYKRGNDGEGPQVYLKREDLNHTGAHKINNAVAQALLAK 365
           GVL+DYVGRESPLYFAERLTEHYKRGN GEGP VYLKREDLNHTGAHKINNAVAQALLAK
Sbjct: 61  GVLKDYVGRESPLYFAERLTEHYKRGN-GEGPHVYLKREDLNHTGAHKINNAVAQALLAK 119

Query: 364 RLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGAKDMERQALNVFRMRLLGAEVRAV 185
           +LGKKRVIAETGAGQHGVATATVCARFGLECVVYMGA DMERQALNVFRMRLLGAEVRAV
Sbjct: 120 KLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGALDMERQALNVFRMRLLGAEVRAV 179

Query: 184 HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFQAVIGKETRKQALEK 5
           H+GTATLKDATSEAIRDWVTNVETTHYILGSV GPHPYPM+VREF AVIGKETRKQALEK
Sbjct: 180 HAGTATLKDATSEAIRDWVTNVETTHYILGSVCGPHPYPMMVREFHAVIGKETRKQALEK 239

Query: 4   W 2
           W
Sbjct: 240 W 240


>ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
          Length = 471

 Score =  437 bits (1123), Expect = e-120
 Identities = 214/246 (86%), Positives = 232/246 (94%)
 Frame = -2

Query: 739 STVLPMEGRNDHHTGSVLSQRPDSFGRFGRFGGKYVPETLIHALTQLEAAFHSLASDEDF 560
           S+V+P+E  +    GSVL QRPDSFGRFG+FGGKYVPETL+HAL+QLEAAF+SLA+DE+F
Sbjct: 55  SSVVPLEEHDKMGNGSVLLQRPDSFGRFGKFGGKYVPETLMHALSQLEAAFYSLAADEEF 114

Query: 559 QRELDGVLRDYVGRESPLYFAERLTEHYKRGNDGEGPQVYLKREDLNHTGAHKINNAVAQ 380
           Q EL G+L+DYVGRESPLYFAERLTEHYKR N GEGP +YLKREDLNHTGAHKINNAVAQ
Sbjct: 115 QTELAGILKDYVGRESPLYFAERLTEHYKRPN-GEGPHIYLKREDLNHTGAHKINNAVAQ 173

Query: 379 ALLAKRLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGAKDMERQALNVFRMRLLGA 200
           ALLAKRLGKKR+IAETGAGQHGVATATVCARFGLEC++YMGA+DMERQALNVFRMRLLGA
Sbjct: 174 ALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGA 233

Query: 199 EVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFQAVIGKETRK 20
           EVR VHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VREF AVIGKETRK
Sbjct: 234 EVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRK 293

Query: 19  QALEKW 2
           QALEKW
Sbjct: 294 QALEKW 299


>gb|AFK35529.1| unknown [Lotus japonicus]
          Length = 417

 Score =  436 bits (1122), Expect = e-120
 Identities = 215/231 (93%), Positives = 225/231 (97%)
 Frame = -2

Query: 694 SVLSQRPDSFGRFGRFGGKYVPETLIHALTQLEAAFHSLASDEDFQRELDGVLRDYVGRE 515
           SVLS RPDSFGR+GRFGGKYVPETL+HA+T+LEAAFHSLA DE FQ+EL G+LRDYVGRE
Sbjct: 16  SVLSHRPDSFGRYGRFGGKYVPETLMHAITELEAAFHSLAHDEAFQKELGGILRDYVGRE 75

Query: 514 SPLYFAERLTEHYKRGNDGEGPQVYLKREDLNHTGAHKINNAVAQALLAKRLGKKRVIAE 335
           SPLYFAERLTEHY+RG DGEGP VYLKREDLNHTGAHKINNAVAQALLAKRLGKKRVIAE
Sbjct: 76  SPLYFAERLTEHYRRG-DGEGPHVYLKREDLNHTGAHKINNAVAQALLAKRLGKKRVIAE 134

Query: 334 TGAGQHGVATATVCARFGLECVVYMGAKDMERQALNVFRMRLLGAEVRAVHSGTATLKDA 155
           TGAGQHGVATATVCARFGLECVVYMGA+DMERQ+LNVFRMRLLGAEVRAVHSGTATLKDA
Sbjct: 135 TGAGQHGVATATVCARFGLECVVYMGAQDMERQSLNVFRMRLLGAEVRAVHSGTATLKDA 194

Query: 154 TSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFQAVIGKETRKQALEKW 2
           TSEAIRDWVTNVETTHYILGSVAGPHPYPM+VREFQAVIGKETRKQALEKW
Sbjct: 195 TSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEKW 245


>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
          Length = 479

 Score =  436 bits (1121), Expect = e-120
 Identities = 212/245 (86%), Positives = 232/245 (94%)
 Frame = -2

Query: 736 TVLPMEGRNDHHTGSVLSQRPDSFGRFGRFGGKYVPETLIHALTQLEAAFHSLASDEDFQ 557
           +V+P+E  +    GSVL QRPDSFGRFG+FGGKYVPETL+HALT+LEAAF+SL++DE+FQ
Sbjct: 64  SVVPLEEHSKMDNGSVLLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFYSLSADEEFQ 123

Query: 556 RELDGVLRDYVGRESPLYFAERLTEHYKRGNDGEGPQVYLKREDLNHTGAHKINNAVAQA 377
           +EL G+L+DYVGRESPLYFAERLTEHYKR N GEGP +YLKREDLNHTGAHKINNAVAQA
Sbjct: 124 KELAGILKDYVGRESPLYFAERLTEHYKRPN-GEGPHIYLKREDLNHTGAHKINNAVAQA 182

Query: 376 LLAKRLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGAKDMERQALNVFRMRLLGAE 197
           LLAKRLGKKR+IAETGAGQHGVATATVCARFGLEC++YMGA+DMERQALNVFRMRLLGAE
Sbjct: 183 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAE 242

Query: 196 VRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFQAVIGKETRKQ 17
           VR VHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VREF AVIGKETRKQ
Sbjct: 243 VRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQ 302

Query: 16  ALEKW 2
           ALEKW
Sbjct: 303 ALEKW 307


>ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago truncatula]
           gi|355488995|gb|AES70198.1| Tryptophan synthase beta
           chain [Medicago truncatula]
          Length = 466

 Score =  431 bits (1109), Expect = e-119
 Identities = 211/246 (85%), Positives = 230/246 (93%)
 Frame = -2

Query: 739 STVLPMEGRNDHHTGSVLSQRPDSFGRFGRFGGKYVPETLIHALTQLEAAFHSLASDEDF 560
           S+VLP++  N    GSV+ QRPDSFGRFG+FGGKYVPETL+HALT LEA+FHSLA DEDF
Sbjct: 54  SSVLPLQDAN----GSVVLQRPDSFGRFGKFGGKYVPETLMHALTLLEASFHSLAGDEDF 109

Query: 559 QRELDGVLRDYVGRESPLYFAERLTEHYKRGNDGEGPQVYLKREDLNHTGAHKINNAVAQ 380
           Q+EL G+L+DYVGRE+PLYFAERLTEHYK  N GEGP +YLKREDLNHTGAHKINNAVAQ
Sbjct: 110 QKELAGILKDYVGRETPLYFAERLTEHYKNAN-GEGPHIYLKREDLNHTGAHKINNAVAQ 168

Query: 379 ALLAKRLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGAKDMERQALNVFRMRLLGA 200
           ALLAK+LGKKR+IAETGAGQHGVATATVCARFGLEC++YMGA+DMERQALNVFRMRLLGA
Sbjct: 169 ALLAKKLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGA 228

Query: 199 EVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFQAVIGKETRK 20
           EVR VH+GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VREF AVIGKETRK
Sbjct: 229 EVRPVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRK 288

Query: 19  QALEKW 2
           QALEKW
Sbjct: 289 QALEKW 294


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