BLASTX nr result

ID: Glycyrrhiza24_contig00020142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020142
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...    88   7e-16
emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]    88   7e-16
ref|XP_003608618.1| AT-hook DNA-binding protein [Medicago trunca...    81   1e-13
ref|XP_003539199.1| PREDICTED: putative DNA-binding protein ESCA...    71   9e-11
gb|AFK38460.1| unknown [Medicago truncatula]                           70   2e-10

>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = -2

Query: 527 GSNINNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 396
           G  INNPFPDPS+GLPFFNLPLNM N QLPVDGWAGNS ARPPF
Sbjct: 239 GGGINNPFPDPSAGLPFFNLPLNMPNCQLPVDGWAGNSGARPPF 282


>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = -2

Query: 527 GSNINNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 396
           G  INNPFPDPS+GLPFFNLPLNM N QLPVDGWAGNS ARPPF
Sbjct: 239 GGGINNPFPDPSAGLPFFNLPLNMPNCQLPVDGWAGNSGARPPF 282


>ref|XP_003608618.1| AT-hook DNA-binding protein [Medicago truncatula]
           gi|355509673|gb|AES90815.1| AT-hook DNA-binding protein
           [Medicago truncatula]
          Length = 285

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/48 (83%), Positives = 42/48 (87%), Gaps = 4/48 (8%)
 Frame = -2

Query: 527 GSNINNPFPDPSSGLPFFNLPLNMQNV-QLPVDGWAG---NSAARPPF 396
           G+N NNPFPDPSSGLPFFNLPLNMQNV QLPVDGWAG   NSA+R PF
Sbjct: 238 GNNNNNPFPDPSSGLPFFNLPLNMQNVHQLPVDGWAGNNNNSASRQPF 285


>ref|XP_003539199.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 250

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 33/45 (73%), Positives = 35/45 (77%)
 Frame = -2

Query: 530 VGSNINNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 396
           V  N +NPFPDPSSGLPFFNLP+   NVQLPVD WAGNS  R PF
Sbjct: 209 VAGNNSNPFPDPSSGLPFFNLPM---NVQLPVDAWAGNSTTRSPF 250


>gb|AFK38460.1| unknown [Medicago truncatula]
          Length = 269

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/44 (72%), Positives = 34/44 (77%)
 Frame = -2

Query: 527 GSNINNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSAARPPF 396
           G  +NN FPDPSSGLPFFNLPLNM   QLPVDGWAGNS  R  +
Sbjct: 228 GDGVNNSFPDPSSGLPFFNLPLNMP--QLPVDGWAGNSGGRQSY 269


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