BLASTX nr result

ID: Glycyrrhiza24_contig00020131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020131
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine ...   235   2e-60
ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-contain...   205   3e-51
ref|XP_003523738.1| PREDICTED: LOW QUALITY PROTEIN: lissencephal...   205   3e-51
emb|CBI20863.3| unnamed protein product [Vitis vinifera]              205   3e-51
emb|CAN66946.1| hypothetical protein VITISV_020093 [Vitis vinifera]   205   3e-51

>ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine max]
          Length = 457

 Score =  235 bits (600), Expect = 2e-60
 Identities = 109/119 (91%), Positives = 114/119 (95%)
 Frame = -1

Query: 361 DGMINFWEKERLCYRFDHGGFLQGHRFAVLCLATVGGMIFSGSEDTTIRAWKREEGSCYH 182
           DGMINFWEKERLCYRF+HGGFLQGHRFAVLCLATVG M+FSGSEDTTIR W+REEGSCYH
Sbjct: 302 DGMINFWEKERLCYRFNHGGFLQGHRFAVLCLATVGNMLFSGSEDTTIRVWRREEGSCYH 361

Query: 181 ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDHTFKVWRIKSLQPDEKMCLEYS 5
           ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLD TFKVWRIK L PDEKMC++YS
Sbjct: 362 ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIKVL-PDEKMCMDYS 419


>ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Vitis vinifera]
          Length = 400

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/120 (80%), Positives = 105/120 (87%), Gaps = 1/120 (0%)
 Frame = -1

Query: 361 DGMINFWEKERLCYRFDHGGFLQGHRFAVLCLATVGGMIFSGSEDTTIRAWKREEGSCYH 182
           DG INFWEKE++  RF+HGGFLQGHRFAVLCL  V  ++FSGSEDTTIR W+REEGSCYH
Sbjct: 247 DGFINFWEKEKMSGRFNHGGFLQGHRFAVLCLVAVEKLVFSGSEDTTIRVWRREEGSCYH 306

Query: 181 ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDHTFKVWRIKSLQPDE-KMCLEYS 5
           ECL VLDGHRGPVRCLAACLEMEKVVMGFLVYSASLD TFKVWRI+ L  D+ KMCL+ S
Sbjct: 307 ECLAVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIRVLPDDQKKMCLDES 366


>ref|XP_003523738.1| PREDICTED: LOW QUALITY PROTEIN: lissencephaly-1 homolog [Glycine
           max]
          Length = 448

 Score =  205 bits (522), Expect = 3e-51
 Identities = 98/119 (82%), Positives = 104/119 (87%)
 Frame = -1

Query: 361 DGMINFWEKERLCYRFDHGGFLQGHRFAVLCLATVGGMIFSGSEDTTIRAWKREEGSCYH 182
           DGMINFWEKERLCYRF+HGGFLQGHRFAVLCLATVG MIFSGSEDTTIR W+REEGSCYH
Sbjct: 303 DGMINFWEKERLCYRFNHGGFLQGHRFAVLCLATVGNMIFSGSEDTTIRVWRREEGSCYH 362

Query: 181 ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDHTFKVWRIKSLQPDEKMCLEYS 5
           ECLTVLDGHRGPV+CLAACLEMEKVVM  L Y        KVWRI S+ PDEKMC++YS
Sbjct: 363 ECLTVLDGHRGPVKCLAACLEMEKVVMVLLGY-------IKVWRI-SVLPDEKMCMDYS 413


>emb|CBI20863.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/120 (80%), Positives = 105/120 (87%), Gaps = 1/120 (0%)
 Frame = -1

Query: 361 DGMINFWEKERLCYRFDHGGFLQGHRFAVLCLATVGGMIFSGSEDTTIRAWKREEGSCYH 182
           DG INFWEKE++  RF+HGGFLQGHRFAVLCL  V  ++FSGSEDTTIR W+REEGSCYH
Sbjct: 295 DGFINFWEKEKMSGRFNHGGFLQGHRFAVLCLVAVEKLVFSGSEDTTIRVWRREEGSCYH 354

Query: 181 ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDHTFKVWRIKSLQPDE-KMCLEYS 5
           ECL VLDGHRGPVRCLAACLEMEKVVMGFLVYSASLD TFKVWRI+ L  D+ KMCL+ S
Sbjct: 355 ECLAVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIRVLPDDQKKMCLDES 414


>emb|CAN66946.1| hypothetical protein VITISV_020093 [Vitis vinifera]
          Length = 432

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/120 (80%), Positives = 105/120 (87%), Gaps = 1/120 (0%)
 Frame = -1

Query: 361 DGMINFWEKERLCYRFDHGGFLQGHRFAVLCLATVGGMIFSGSEDTTIRAWKREEGSCYH 182
           DG INFWEKE++  RF+HGGFLQGHRFAVLCL  V  ++FSGSEDTTIR W+REEGSCYH
Sbjct: 279 DGFINFWEKEKMSGRFNHGGFLQGHRFAVLCLVAVEKLVFSGSEDTTIRVWRREEGSCYH 338

Query: 181 ECLTVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDHTFKVWRIKSLQPDE-KMCLEYS 5
           ECL VLDGHRGPVRCLAACLEMEKVVMGFLVYSASLD TFKVWRI+ L  D+ KMCL+ S
Sbjct: 339 ECLAVLDGHRGPVRCLAACLEMEKVVMGFLVYSASLDQTFKVWRIRVLPDDQKKMCLDES 398


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