BLASTX nr result
ID: Glycyrrhiza24_contig00020124
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00020124
(557 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi... 322 2e-86
ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ... 315 2e-84
ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 268 4e-70
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi... 254 8e-66
emb|CBI30973.3| unnamed protein product [Vitis vinifera] 254 8e-66
>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 322 bits (825), Expect = 2e-86
Identities = 156/185 (84%), Positives = 170/185 (91%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+IRGLCSE R+EDGFS+LELMEESKEG RGHISPYNSIIYGL K+N FDE+AEFLTKMG
Sbjct: 387 LIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGN 446
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
LFPRAVDRSL IL+HCK+G AIEDAKRVYDQMIDEGGIPSILVYNC+VHGFSK+G+VREA
Sbjct: 447 LFPRAVDRSLMILEHCKKG-AIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREA 505
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
VEL+NEM+ANNCFPIPSTFN +ITGFCR GKVESALK +EDITARGCVP T TYS LID
Sbjct: 506 VELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDV 565
Query: 16 LCRRG 2
LCR G
Sbjct: 566 LCRNG 570
Score = 82.4 bits (202), Expect = 4e-14
Identities = 46/185 (24%), Positives = 91/185 (49%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+++GLC R+ +GF +L+L++ G + YN++++ L + + A + +M
Sbjct: 181 LMKGLCLTNRIGEGFKLLQLIKS--RGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED 238
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
P V ++ I +CKEG +++ A + ++ G +P ++ ++ G EA
Sbjct: 239 --PNDVTFNILISGYCKEGNSVQ-ALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEA 295
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
E++ + + +N +I GFC GKV+ L F++ + +GC+P TY+ LI
Sbjct: 296 AEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISG 355
Query: 16 LCRRG 2
G
Sbjct: 356 FSESG 360
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Frame = -2
Query: 460 SPYNSIIYGLFKQNRFDEAAEFLTKMGKLF--PRAVDRSLKILQHCKEGTAIEDAKRVYD 287
S Y ++I+ L RFD + L +M P D + I++ +V D
Sbjct: 70 STYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLD 129
Query: 286 QMIDEGGIPSILVYNCIVHGFSKEGSVREAVELINEMMANNCFPIPSTFNPIITGFCRLG 107
+ G PS+ ++N I+ KE MMA+ TF ++ G C
Sbjct: 130 LVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTN 189
Query: 106 KVESALKFMEDITARGCVPKTATYSTLIDALCRRG 2
++ K ++ I +RG P T Y+TL+ ALCR G
Sbjct: 190 RIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNG 224
>ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 315 bits (808), Expect = 2e-84
Identities = 152/185 (82%), Positives = 168/185 (90%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
MIRGLCSEGR+EDGFS+LELMEE+KEG +GHISPYNSIIYGLFKQNRFDEA+EFL KMGK
Sbjct: 389 MIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGK 448
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
LFPRAVDRS+ I+Q CKEG AIEDAK +YD+MIDEGGIPSILVYN +VHGFS+ GS+REA
Sbjct: 449 LFPRAVDRSMTIIQKCKEG-AIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREA 507
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
VELINEM++NNCFPI STFN IIT FC GK+ESALKFMEDITARGCVP T TYS LID
Sbjct: 508 VELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDV 567
Query: 16 LCRRG 2
LCR+G
Sbjct: 568 LCRKG 572
Score = 67.4 bits (163), Expect = 1e-09
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+++GLC R+ +GF +L+L++ + G + YN++++ L + + A + +M
Sbjct: 183 LMKGLCLTNRIGEGFKLLQLIKNN--GVTPNTVIYNTLLHALCRNGKVGRARSLMNEM-- 238
Query: 376 LFPRAVDRSLKILQHCKEGTAIE----------------------------------DAK 299
+ P V ++ I + KE ++ +A
Sbjct: 239 VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAA 298
Query: 298 RVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREAVELINEMMANNCFPIPSTFNPIITGF 119
V +++ GG + YN ++ GF G V+ + + +M P T+N +I GF
Sbjct: 299 EVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGF 358
Query: 118 CRLGKVESALKFMEDITARGCVPKTATYSTLIDALCRRG 2
C ++ AL D+ G T+ T+I LC G
Sbjct: 359 CESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEG 397
Score = 58.2 bits (139), Expect = 9e-07
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISP----YNSIIYGLFKQNRFDEAAEFLT 389
++RGL G +VL+L + H +P +NSI+ L K++ D A EF
Sbjct: 113 IVRGLSRAGMTRRVITVLDL------AYKFHGTPSLKIFNSILDVLVKED-IDMAREFYR 165
Query: 388 K-MGKLFPRAVDRSLKILQH--CKEGTAIEDAKRVYDQMIDEGGI-PSILVYNCIVHGFS 221
K M + R D + IL C E K + Q+I G+ P+ ++YN ++H
Sbjct: 166 KSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLL--QLIKNNGVTPNTVIYNTLLHALC 223
Query: 220 KEGSVREAVELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTA 41
+ G V A L+NEM+ P TFN +I+ + + + AL +E A VP
Sbjct: 224 RNGKVGRARSLMNEMVD----PNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVV 279
Query: 40 TYSTLIDALCRRG 2
T + +++ LC G
Sbjct: 280 TVTKVVEILCNAG 292
>ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17525, mitochondrial-like, partial [Glycine
max]
Length = 435
Score = 268 bits (685), Expect = 4e-70
Identities = 132/183 (72%), Positives = 153/183 (83%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+IRGLCSEGR+EDGFS+LE MEESKEG RGHI+PYNSIIYGL KQN FD+ EFLTKMG
Sbjct: 210 IIRGLCSEGRIEDGFSILESMEESKEGSRGHINPYNSIIYGLLKQNXFDDTTEFLTKMGN 269
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
LFPR VD+SL I +HCK+G +IEDA+R+ DQMIDEGGI SILVYNC+VHGFS++G + EA
Sbjct: 270 LFPRVVDKSLMIFEHCKKG-SIEDAERLCDQMIDEGGISSILVYNCLVHGFSQQGRIXEA 328
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
VEL+NEM+ANN FPIPSTFN +I VE ALK +E+ITARGCVP T TYS+LID
Sbjct: 329 VELMNEMIANNRFPIPSTFNVVI-------XVEGALKLVEEITARGCVPNTETYSSLIDV 381
Query: 16 LCR 8
LCR
Sbjct: 382 LCR 384
Score = 78.2 bits (191), Expect = 8e-13
Identities = 45/182 (24%), Positives = 88/182 (48%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+++GLC R+ +GF +L+L++ G + YN++I+ L + A + +M
Sbjct: 4 LMKGLCLTNRIVEGFKLLQLIK--SRGVASNTMVYNTLIHALCRNGEVGRARNLMNEMKD 61
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
P V ++ I + KEG ++ A + ++ G +P ++ ++ G EA
Sbjct: 62 --PNDVTFNILIFGYYKEGNSVW-ALILLEKSFSMGFVPDVVSVTMVLEILCNVGCTIEA 118
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
E+++ + + N +I GFC G V+ L F++ + ++GC+P TY+ LI
Sbjct: 119 AEVLDXIESMGGLLDVVAXNTLIKGFCEAGNVKVGLHFLKQMESKGCLPNVDTYNVLISG 178
Query: 16 LC 11
C
Sbjct: 179 FC 180
>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 254 bits (648), Expect = 8e-66
Identities = 122/185 (65%), Positives = 149/185 (80%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+IRGLCS GR+EDGF +LELMEES+ G G ISPYNSIIYGL+K+N+F+EA EFLTKM K
Sbjct: 445 LIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEK 504
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
LFPRAVDRSL+IL C EG+ I DAKRVYDQMI EGG+PS+LVY C++HGF ++G+VREA
Sbjct: 505 LFPRAVDRSLRILGFCNEGS-IGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREA 563
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
ELINEM+ + FP TFN +I+ FC GKV SALK MED+ RGC+P +YS ++DA
Sbjct: 564 FELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDA 623
Query: 16 LCRRG 2
LC +G
Sbjct: 624 LCNKG 628
Score = 75.1 bits (183), Expect = 7e-12
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+++GLC R+ D F +L++M+ G + YN++I+ L K + A + +M +
Sbjct: 239 LMKGLCLTNRIGDAFKLLQVMKS--RGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE 296
Query: 376 LFPRAVDRSLKILQHCKEGTAIE----------------------------------DAK 299
P V ++ I +C+E ++ +
Sbjct: 297 --PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGV 354
Query: 298 RVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREAVELINEMMANNCFPIPSTFNPIITGF 119
V +++ GG+ ++ YN ++ GF G + ++ +M C P T+N + +G+
Sbjct: 355 EVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGY 414
Query: 118 CRLGKVESALKFMEDITARGCVPKTATYSTLIDALCRRG 2
C G ++SA+ D+ G TY TLI LC G
Sbjct: 415 CDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGG 453
Score = 68.2 bits (165), Expect = 8e-10
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 5/190 (2%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
++RGL V VL+L+ +K G + +NSI+ L K++ D A EF K K
Sbjct: 169 IVRGLGRARMVRQMIKVLDLI--TKFGENPSLKIFNSILDVLVKED-IDLAREFYRK--K 223
Query: 376 LFPRAV---DRSLKILQH--CKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEG 212
+ V D + IL C I DA ++ M G P+ ++YN ++H K G
Sbjct: 224 MMMNGVSGDDYTFGILMKGLCLTNR-IGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNG 282
Query: 211 SVREAVELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYS 32
V A L+NEM+ P TFN +I+ +C+ + AL +E + G VP T +
Sbjct: 283 KVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTAT 338
Query: 31 TLIDALCRRG 2
++ LC+ G
Sbjct: 339 KVVGILCKAG 348
Score = 61.6 bits (148), Expect = 8e-08
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Frame = -2
Query: 460 SPYNSIIYGLFKQNRFDEAAEFLTKMGKLFPRAVDRSL--KILQHCKEGTAIEDAKRVYD 287
S Y ++I+ L RF+ E L +M D S+ I++ + +V D
Sbjct: 128 STYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLD 187
Query: 286 QMIDEGGIPSILVYNCIVHGFSKEGSVREAVELINE-----MMANNCFPIPSTFNPIITG 122
+ G PS+ ++N I+ + V+E ++L E MM N TF ++ G
Sbjct: 188 LITKFGENPSLKIFNSIL-----DVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKG 242
Query: 121 FCRLGKVESALKFMEDITARGCVPKTATYSTLIDALCRRG 2
C ++ A K ++ + +RG P T Y+T+I ALC+ G
Sbjct: 243 LCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNG 282
>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 254 bits (648), Expect = 8e-66
Identities = 122/185 (65%), Positives = 149/185 (80%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+IRGLCS GR+EDGF +LELMEES+ G G ISPYNSIIYGL+K+N+F+EA EFLTKM K
Sbjct: 293 LIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEK 352
Query: 376 LFPRAVDRSLKILQHCKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREA 197
LFPRAVDRSL+IL C EG+ I DAKRVYDQMI EGG+PS+LVY C++HGF ++G+VREA
Sbjct: 353 LFPRAVDRSLRILGFCNEGS-IGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREA 411
Query: 196 VELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYSTLIDA 17
ELINEM+ + FP TFN +I+ FC GKV SALK MED+ RGC+P +YS ++DA
Sbjct: 412 FELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDA 471
Query: 16 LCRRG 2
LC +G
Sbjct: 472 LCNKG 476
Score = 75.1 bits (183), Expect = 7e-12
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
+++GLC R+ D F +L++M+ G + YN++I+ L K + A + +M +
Sbjct: 87 LMKGLCLTNRIGDAFKLLQVMKS--RGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE 144
Query: 376 LFPRAVDRSLKILQHCKEGTAIE----------------------------------DAK 299
P V ++ I +C+E ++ +
Sbjct: 145 --PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGV 202
Query: 298 RVYDQMIDEGGIPSILVYNCIVHGFSKEGSVREAVELINEMMANNCFPIPSTFNPIITGF 119
V +++ GG+ ++ YN ++ GF G + ++ +M C P T+N + +G+
Sbjct: 203 EVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGY 262
Query: 118 CRLGKVESALKFMEDITARGCVPKTATYSTLIDALCRRG 2
C G ++SA+ D+ G TY TLI LC G
Sbjct: 263 CDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGG 301
Score = 68.2 bits (165), Expect = 8e-10
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 5/190 (2%)
Frame = -2
Query: 556 MIRGLCSEGRVEDGFSVLELMEESKEGCRGHISPYNSIIYGLFKQNRFDEAAEFLTKMGK 377
++RGL V VL+L+ +K G + +NSI+ L K++ D A EF K K
Sbjct: 17 IVRGLGRARMVRQMIKVLDLI--TKFGENPSLKIFNSILDVLVKED-IDLAREFYRK--K 71
Query: 376 LFPRAV---DRSLKILQH--CKEGTAIEDAKRVYDQMIDEGGIPSILVYNCIVHGFSKEG 212
+ V D + IL C I DA ++ M G P+ ++YN ++H K G
Sbjct: 72 MMMNGVSGDDYTFGILMKGLCLTNR-IGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNG 130
Query: 211 SVREAVELINEMMANNCFPIPSTFNPIITGFCRLGKVESALKFMEDITARGCVPKTATYS 32
V A L+NEM+ P TFN +I+ +C+ + AL +E + G VP T +
Sbjct: 131 KVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTAT 186
Query: 31 TLIDALCRRG 2
++ LC+ G
Sbjct: 187 KVVGILCKAG 196