BLASTX nr result

ID: Glycyrrhiza24_contig00020118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020118
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34047.1| unknown [Lotus japonicus]                               73   2e-11
ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycin...    69   4e-10
ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817...    64   1e-08
gb|ACU24536.1| unknown [Glycine max]                                   64   1e-08
ref|XP_003628092.1| Pre-rRNA-processing protein TSR2-like protei...    59   5e-07

>gb|AFK34047.1| unknown [Lotus japonicus]
          Length = 202

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +1

Query: 49  NSANMDVDIPKSEANMNSVNRPVNGPLPKVAGEANDGWVVVS 174
           NS+NMDVDIPKSE++MNSVNRPVNG LPKVA EA+D W VVS
Sbjct: 152 NSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVS 193


>ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycine max]
           gi|255641901|gb|ACU21219.1| unknown [Glycine max]
          Length = 201

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +1

Query: 49  NSANMDVDIPKSEANMNSVNRPVNGPLPKVAGEANDGWVVVS 174
           NS+ M++DI  S++NMNSVNRPVN PLPKV+GEA+DGWVVVS
Sbjct: 151 NSSKMNLDISTSDSNMNSVNRPVNEPLPKVSGEADDGWVVVS 192


>ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max]
          Length = 203

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +1

Query: 49  NSANMDVDIPKSEANMNSVNRPVNGPLPKVAGEANDGWVVVS 174
           NS+NM+ +   S AN NSVNR VNGPLPKV+GEA+DGWVVVS
Sbjct: 153 NSSNMNPETSTSVANTNSVNRSVNGPLPKVSGEADDGWVVVS 194


>gb|ACU24536.1| unknown [Glycine max]
          Length = 203

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +1

Query: 49  NSANMDVDIPKSEANMNSVNRPVNGPLPKVAGEANDGWVVVS 174
           NS+NM+ +   S AN NSVNR VNGPLPKV+GEA+DGWVVVS
Sbjct: 153 NSSNMNPETSTSVANTNSVNRSVNGPLPKVSGEADDGWVVVS 194


>ref|XP_003628092.1| Pre-rRNA-processing protein TSR2-like protein [Medicago truncatula]
           gi|355522114|gb|AET02568.1| Pre-rRNA-processing protein
           TSR2-like protein [Medicago truncatula]
           gi|388496072|gb|AFK36102.1| unknown [Medicago
           truncatula]
          Length = 206

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
 Frame = +1

Query: 49  NSANMDVDIPKSEANMNSVNRPVNGPLPKVAGEAN-----DGWVVVS 174
           NSANMDVDIPKSE+N+NS+N+ VNG  P   GE N     DGW VVS
Sbjct: 151 NSANMDVDIPKSESNLNSMNKTVNGSQPDNPGEDNSGEGDDGWSVVS 197


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