BLASTX nr result
ID: Glycyrrhiza24_contig00020117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00020117
(626 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003611144.1| F-box family protein [Medicago truncatula] g... 271 1e-85
ref|XP_003525727.1| PREDICTED: F-box protein PP2-A12-like [Glyci... 271 6e-84
ref|XP_003550877.1| PREDICTED: F-box protein PP2-A12-like [Glyci... 265 2e-82
gb|AFK40981.1| unknown [Medicago truncatula] 261 9e-82
gb|AFK42987.1| unknown [Lotus japonicus] 256 2e-79
>ref|XP_003611144.1| F-box family protein [Medicago truncatula]
gi|355512479|gb|AES94102.1| F-box family protein
[Medicago truncatula]
Length = 283
Score = 271 bits (693), Expect(2) = 1e-85
Identities = 124/146 (84%), Positives = 133/146 (91%), Gaps = 1/146 (0%)
Frame = +3
Query: 3 WLDRSTGKLCLAISS-KGLLITGIDDRRYWNQIHTEESRFNTVAYLHQIWWFQVDGEVEF 179
W+DR+TGKLCLAIS+ KGL + G+DDRRYWN I TEESRFNTVAYL WWF+VDGEV+F
Sbjct: 103 WIDRATGKLCLAISANKGLSVLGVDDRRYWNYIITEESRFNTVAYLQHTWWFEVDGEVDF 162
Query: 180 PFPAGTYSLFFRIHLGRASKRFRRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKG 359
PFPAGTYSLFFRIHLG+A KRF RRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKG
Sbjct: 163 PFPAGTYSLFFRIHLGQAYKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKG 222
Query: 360 PGNWTFHHAGDFKVEDGNSLTKVKFS 437
GNWTF+HAGDF VEDGNS TKVKFS
Sbjct: 223 TGNWTFYHAGDFTVEDGNSSTKVKFS 248
Score = 71.6 bits (174), Expect(2) = 1e-85
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 436 LTQIDCTHTKGGLCLDSVFIYPSEFKKMKPFLNCS 540
+TQIDCTHTKGGLCLDS FIYPSEFKK K FLNCS
Sbjct: 249 MTQIDCTHTKGGLCLDSAFIYPSEFKKSKSFLNCS 283
>ref|XP_003525727.1| PREDICTED: F-box protein PP2-A12-like [Glycine max]
Length = 287
Score = 271 bits (693), Expect(2) = 6e-84
Identities = 122/145 (84%), Positives = 130/145 (89%)
Frame = +3
Query: 3 WLDRSTGKLCLAISSKGLLITGIDDRRYWNQIHTEESRFNTVAYLHQIWWFQVDGEVEFP 182
WLDR GKLCL +S+KGL ITGIDDRRYWN I T+ESRF++VAYL QIWWFQVDGEVEFP
Sbjct: 108 WLDRGMGKLCLCVSAKGLSITGIDDRRYWNHIPTDESRFSSVAYLQQIWWFQVDGEVEFP 167
Query: 183 FPAGTYSLFFRIHLGRASKRFRRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKGP 362
FPAG YS+FFRIHLGRA KRF RRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFL GP
Sbjct: 168 FPAGKYSVFFRIHLGRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLNGP 227
Query: 363 GNWTFHHAGDFKVEDGNSLTKVKFS 437
G W F+HAGDF VEDGN+ TKVKFS
Sbjct: 228 GKWIFYHAGDFVVEDGNASTKVKFS 252
Score = 65.9 bits (159), Expect(2) = 6e-84
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +1
Query: 436 LTQIDCTHTKGGLCLDSVFIYPSEFKKMKPFLNCS 540
+TQIDCTHTKGGLCLDSV +YPSEF+K+K FLN S
Sbjct: 253 MTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 287
>ref|XP_003550877.1| PREDICTED: F-box protein PP2-A12-like [Glycine max]
Length = 286
Score = 265 bits (678), Expect(2) = 2e-82
Identities = 119/145 (82%), Positives = 129/145 (88%)
Frame = +3
Query: 3 WLDRSTGKLCLAISSKGLLITGIDDRRYWNQIHTEESRFNTVAYLHQIWWFQVDGEVEFP 182
WLDR GKLCL +S+KGL ITGIDDRR WN I T+ESRF++VAYL QIWWF+VDGEVEFP
Sbjct: 107 WLDRGMGKLCLCVSAKGLSITGIDDRRNWNHIPTDESRFSSVAYLQQIWWFEVDGEVEFP 166
Query: 183 FPAGTYSLFFRIHLGRASKRFRRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKGP 362
FPAG YS+FFRIHLGRA KRF RRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFL GP
Sbjct: 167 FPAGKYSVFFRIHLGRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLNGP 226
Query: 363 GNWTFHHAGDFKVEDGNSLTKVKFS 437
G W ++HAGDF VEDGN+ TKVKFS
Sbjct: 227 GKWIYYHAGDFVVEDGNASTKVKFS 251
Score = 66.2 bits (160), Expect(2) = 2e-82
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 436 LTQIDCTHTKGGLCLDSVFIYPSEFKKMKPFLNCS 540
+TQIDCTHTKGGLCLDSV IYPSEF+K+K FLN S
Sbjct: 252 MTQIDCTHTKGGLCLDSVLIYPSEFRKVKAFLNYS 286
>gb|AFK40981.1| unknown [Medicago truncatula]
Length = 286
Score = 261 bits (668), Expect(2) = 9e-82
Identities = 117/145 (80%), Positives = 129/145 (88%)
Frame = +3
Query: 3 WLDRSTGKLCLAISSKGLLITGIDDRRYWNQIHTEESRFNTVAYLHQIWWFQVDGEVEFP 182
WLDRS GK+CL++S+KGL ITGIDDRRYWN + TEESRF++VAYL QIWWF+VDGEVEFP
Sbjct: 107 WLDRSMGKVCLSVSAKGLSITGIDDRRYWNHVPTEESRFSSVAYLQQIWWFEVDGEVEFP 166
Query: 183 FPAGTYSLFFRIHLGRASKRFRRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKGP 362
FPAGTYSLFFRIHLG+ SKRF RRVCNTEHVHGWD KPVRFQLWTSD QY +SQCFLKGP
Sbjct: 167 FPAGTYSLFFRIHLGKPSKRFGRRVCNTEHVHGWDVKPVRFQLWTSDDQYDSSQCFLKGP 226
Query: 363 GNWTFHHAGDFKVEDGNSLTKVKFS 437
G W ++HAGDF VED N TKVKFS
Sbjct: 227 GKWRYYHAGDFVVEDSNVSTKVKFS 251
Score = 68.2 bits (165), Expect(2) = 9e-82
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +1
Query: 436 LTQIDCTHTKGGLCLDSVFIYPSEFKKMKPFLNCS 540
+TQIDCTHTKGGLCLDSVF+YPSEF+K+K FLN S
Sbjct: 252 MTQIDCTHTKGGLCLDSVFVYPSEFRKVKEFLNYS 286
>gb|AFK42987.1| unknown [Lotus japonicus]
Length = 175
Score = 256 bits (654), Expect(2) = 2e-79
Identities = 114/139 (82%), Positives = 125/139 (89%)
Frame = +3
Query: 21 GKLCLAISSKGLLITGIDDRRYWNQIHTEESRFNTVAYLHQIWWFQVDGEVEFPFPAGTY 200
GKLC++IS+KGL ITGIDDRRYWN I TEESRF++VAYL QIWWF+VDGEVEFPFP GTY
Sbjct: 2 GKLCMSISAKGLSITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVEFPFPPGTY 61
Query: 201 SLFFRIHLGRASKRFRRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKGPGNWTFH 380
SLFFR+HLGRASKRF RRVCNTEHVHGWD KP RFQLWTSDGQYV SQC LKGPG W ++
Sbjct: 62 SLFFRLHLGRASKRFGRRVCNTEHVHGWDVKPARFQLWTSDGQYVTSQCLLKGPGKWRYY 121
Query: 381 HAGDFKVEDGNSLTKVKFS 437
HAGDF VEDGN+ TK+KFS
Sbjct: 122 HAGDFVVEDGNASTKIKFS 140
Score = 65.9 bits (159), Expect(2) = 2e-79
Identities = 30/40 (75%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = +1
Query: 424 KLNF-LTQIDCTHTKGGLCLDSVFIYPSEFKKMKPFLNCS 540
K+ F +TQIDCTHTKGGLCLDSV +YPSEF+K+K FLN S
Sbjct: 136 KIKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNNS 175