BLASTX nr result

ID: Glycyrrhiza24_contig00020101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020101
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789...   258   3e-67
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu...   115   3e-24
ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   106   2e-21
ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795...   100   1e-19

>ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789935 [Glycine max]
          Length = 2468

 Score =  258 bits (660), Expect = 3e-67
 Identities = 130/167 (77%), Positives = 145/167 (86%), Gaps = 3/167 (1%)
 Frame = +2

Query: 8    AEDKIVADIKHSVPDDERWKILGTCLWQHMSRFMISNLNLVLAKLEDDNISGSFHR---Y 178
            AEDK+VADIKHS+PDDERWKI+GTCLWQHMSRFMI NLNLVLAKLED  +SG FHR   Y
Sbjct: 1743 AEDKLVADIKHSIPDDERWKIIGTCLWQHMSRFMIFNLNLVLAKLEDGKLSGPFHRKYTY 1802

Query: 179  RESTLINMDSDSISLPEQILLVTFSLSDLLMTTVTHISSYHVKQLAEFLWQKLENDSNVI 358
             ES LINMDS+SISLPE+I LV FSL DLLMTTVTHISSYHVKQ AEFLWQK+ ND NV+
Sbjct: 1803 GESYLINMDSESISLPEKIRLVLFSLCDLLMTTVTHISSYHVKQQAEFLWQKVGNDLNVM 1862

Query: 359  SLKWLKETIQSEPNQNQNLDVLELVNRKDNYLVHQLLWDHCADPKLI 499
            +L+WLK+  +SE +QNQNLD+LEL N KDNY V+QLLWD CADPKLI
Sbjct: 1863 TLQWLKQ--KSEFSQNQNLDILELGNMKDNYSVNQLLWDRCADPKLI 1907


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
            predicted protein [Populus trichocarpa]
          Length = 2434

 Score =  119 bits (297), Expect = 3e-25
 Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
 Frame = +2

Query: 2    KCAEDKIVADIKHSVPDDERWKILGTCLWQHMSRFMISNLNLVLAKLEDDNISGSFH--- 172
            KC+  +       S   DE+W ++G CLW HMSRFM   L+L+  KLED   SG  H   
Sbjct: 1756 KCSSHEQDGQTMLSFSKDEKWHVVGACLWMHMSRFMKHQLHLLSIKLEDGCFSGVSHGNV 1815

Query: 173  RYRESTLINMDSDSISLPEQILLVTFSLSDLLMTTVTHISSYHVKQLAEFLWQKLENDSN 352
                S+L    SDSIS  E+I   +  L+ LL T + H+SSYHVK L  FL Q++EN   
Sbjct: 1816 SSLASSLTIFGSDSISRKEEIGFCSLILAKLLRTMLVHVSSYHVKLLGLFLQQEVENRLQ 1875

Query: 353  VISLKWLKETIQSEPNQNQNLDVLELVNRKDNYLVHQLLWDHCADPKLI 499
            + +L W+KE+  S+          +++N KD      +LWD CADP+++
Sbjct: 1876 IPTLVWMKESSLSQAKALYQDVSADMMNSKDELSSFDVLWDACADPRMV 1924


>ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223537408|gb|EEF39036.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 2299

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/154 (35%), Positives = 87/154 (56%)
 Frame = +2

Query: 38   HSVPDDERWKILGTCLWQHMSRFMISNLNLVLAKLEDDNISGSFHRYRESTLINMDSDSI 217
            HS  +DE+W ++GTCLWQH+SR +   L+L+   +EDD  SG  H    S          
Sbjct: 1807 HSFSEDEKWHVIGTCLWQHLSRLLKHKLHLLSINIEDDCFSGVSHGLISSWPSGSIGSDD 1866

Query: 218  SLPEQILLVTFSLSDLLMTTVTHISSYHVKQLAEFLWQKLENDSNVISLKWLKETIQSEP 397
            ++ ++I+  +  L+ LL  T+ H+SSYHVK     L  K+EN+ ++ +L WLK++I S+ 
Sbjct: 1867 TMKKEIMSFSLILAKLLKITILHVSSYHVKIFGSLLQLKVENELHMTTLTWLKDSIASQA 1926

Query: 398  NQNQNLDVLELVNRKDNYLVHQLLWDHCADPKLI 499
                     +++N KD      +LWD CADP ++
Sbjct: 1927 KVLYQDASADIMNSKDELSTFDILWDTCADPNIV 1960


>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  106 bits (265), Expect = 2e-21
 Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2    KCAEDKIVADIKHSVPDDERWKILGTCLWQHMSRFMISNLNLVLAKLEDDNISGSFHRYR 181
            K  +D    DI  S+P+DER KILG C+W H+S  MI+ LN +          G    + 
Sbjct: 1848 KWMQDAQSGDILPSMPEDERQKILGVCIWHHISSSMINLLNSL----------GDTSSWA 1897

Query: 182  ESTLINMDSDSISLPEQILLVTFSLSDLLMTTVTHISSYHVKQLAEFLWQKLENDSNVIS 361
             S+    + D  SL E+I LV       L TTVT+ISSYH KQLA FL QK+E+  +V +
Sbjct: 1898 SSSTC-CEPDGNSLMEKIKLVPLIFMKFLKTTVTYISSYHAKQLASFLLQKIEDGLHVPT 1956

Query: 362  LKWLKETIQSEP-----NQNQNLDVLELVNRKDNYLVHQLLWDHCADPKLI 499
            L+WL+++ QS+P     N NQ ++ L ++N +D     +++ D  ADPK+I
Sbjct: 1957 LEWLEKSSQSQPRSIQKNLNQGIN-LNIMNIEDKSSASEVIRDIFADPKII 2006


>ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795225 [Glycine max]
          Length = 2369

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +2

Query: 2    KCAEDKIVADIKHSVPDDERWKILGTCLWQHMSRFMISNLNLVLAKLEDD 151
            KCAEDK+VAD+KH +PDDERWKILGTCLWQH SRFMISNLNLVLAKLED+
Sbjct: 1724 KCAEDKLVADLKHLIPDDERWKILGTCLWQHFSRFMISNLNLVLAKLEDE 1773



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/65 (55%), Positives = 43/65 (66%)
 Frame = +2

Query: 305  KQLAEFLWQKLENDSNVISLKWLKETIQSEPNQNQNLDVLELVNRKDNYLVHQLLWDHCA 484
            K L   LWQ       + +L  +   ++ E +QNQNLD+LE  NRKDNY VHQLLWDHCA
Sbjct: 1745 KILGTCLWQHFSRFM-ISNLNLVLAKLEDEFSQNQNLDILEQGNRKDNYSVHQLLWDHCA 1803

Query: 485  DPKLI 499
            DPKLI
Sbjct: 1804 DPKLI 1808


Top