BLASTX nr result

ID: Glycyrrhiza24_contig00020076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020076
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D...   308   3e-82
ref|XP_003625939.1| Cellulose synthase-like protein D5 [Medicago...   305   5e-81
gb|AFK35232.1| unknown [Lotus japonicus]                              299   2e-79
ref|NP_171773.1| 1,4-beta-D-xylan synthase [Arabidopsis thaliana...   293   2e-77
ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arab...   290   1e-76

>ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D5-like [Glycine max]
          Length = 1151

 Score =  308 bits (790), Expect = 3e-82
 Identities = 145/161 (90%), Positives = 148/161 (91%)
 Frame = +2

Query: 2    WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWS 181
            WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLY VKWS
Sbjct: 991  WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWS 1050

Query: 182  FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR 361
            FLMVPPITIMMVN+IAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR
Sbjct: 1051 FLMVPPITIMMVNSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR 1110

Query: 362  GKVPTIVYVWXXXXXXXXXXXWVYVNPPSGRPQDYMNFQFP 484
            GKVPTI+YVW           WVY+NPPSGR QDYMNFQFP
Sbjct: 1111 GKVPTIIYVWSGLLSIIISLLWVYINPPSGRTQDYMNFQFP 1151


>ref|XP_003625939.1| Cellulose synthase-like protein D5 [Medicago truncatula]
           gi|355500954|gb|AES82157.1| Cellulose synthase-like
           protein D5 [Medicago truncatula]
          Length = 636

 Score =  305 bits (780), Expect = 5e-81
 Identities = 143/162 (88%), Positives = 150/162 (92%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWS 181
           WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDG+DEFADLY+VKWS
Sbjct: 475 WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGEDEFADLYLVKWS 534

Query: 182 FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR 361
           FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGG+FFSFWVLCHLYPFAKGL+GRR
Sbjct: 535 FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFWVLCHLYPFAKGLLGRR 594

Query: 362 GKVPTIVYVWXXXXXXXXXXXWVYVNPPSG-RPQDYMNFQFP 484
           GKVPTI+YVW           WVY+NPPSG RPQDY+NFQFP
Sbjct: 595 GKVPTIIYVWSGLLSIIISMLWVYINPPSGARPQDYLNFQFP 636


>gb|AFK35232.1| unknown [Lotus japonicus]
          Length = 292

 Score =  299 bits (766), Expect = 2e-79
 Identities = 140/161 (86%), Positives = 146/161 (90%)
 Frame = +2

Query: 2   WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWS 181
           WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLY VKWS
Sbjct: 132 WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWS 191

Query: 182 FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR 361
           FLMVPPITIMMVN IAIAVG +RTLYSPFPQWSRLVGGVFFSFWVLCHLYPFA+GL+GRR
Sbjct: 192 FLMVPPITIMMVNMIAIAVGGSRTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAEGLLGRR 251

Query: 362 GKVPTIVYVWXXXXXXXXXXXWVYVNPPSGRPQDYMNFQFP 484
           GKVPTIVYVW           WVY+NPP+GR QDY+NFQFP
Sbjct: 252 GKVPTIVYVWSGLISIIISMLWVYINPPAGRTQDYLNFQFP 292


>ref|NP_171773.1| 1,4-beta-D-xylan synthase [Arabidopsis thaliana]
            gi|75207418|sp|Q9SRW9.1|CSLD5_ARATH RecName:
            Full=Cellulose synthase-like protein D5; Short=AtCslD5
            gi|6056428|gb|AAF02892.1|AC009525_26 Very similar to
            cellulose synthase catalytic subunit [Arabidopsis
            thaliana] gi|332189343|gb|AEE27464.1| 1,4-beta-D-xylan
            synthase [Arabidopsis thaliana]
          Length = 1181

 Score =  293 bits (749), Expect = 2e-77
 Identities = 137/161 (85%), Positives = 146/161 (90%)
 Frame = +2

Query: 2    WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWS 181
            WWRNEQFW+IGGTSAHPAAVLQGLLKVIAGVDISFTLTSKS+ PEDGDDEFADLYVVKWS
Sbjct: 1022 WWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLYVVKWS 1081

Query: 182  FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR 361
            FLMVPP+TIMMVN IAIAVG+ARTLYSPFPQWS+LVGGVFFSFWVLCHLYPFAKGLMGRR
Sbjct: 1082 FLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRR 1141

Query: 362  GKVPTIVYVWXXXXXXXXXXXWVYVNPPSGRPQDYMNFQFP 484
            G+VPTIV+VW           WVY+NPPSG+ QDYM FQFP
Sbjct: 1142 GRVPTIVFVWSGLLSIIVSLLWVYINPPSGK-QDYMQFQFP 1181


>ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arabidopsis lyrata subsp.
            lyrata] gi|297337963|gb|EFH68380.1| hypothetical protein
            ARALYDRAFT_887416 [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  290 bits (742), Expect = 1e-76
 Identities = 135/161 (83%), Positives = 146/161 (90%)
 Frame = +2

Query: 2    WWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWS 181
            WWRNEQFW+IGGTSAHPAAVLQGLLKVIAGVDISFTLTSKS+TPE+G+DEFADLY VKWS
Sbjct: 1025 WWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSTPEEGEDEFADLYAVKWS 1084

Query: 182  FLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRR 361
            FLMVPP+TIMMVN IAIAVG+ARTLYSPFPQWS+LVGGVFFSFWVLCHLYPFAKGLMGRR
Sbjct: 1085 FLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRR 1144

Query: 362  GKVPTIVYVWXXXXXXXXXXXWVYVNPPSGRPQDYMNFQFP 484
            G+VPTIV+VW           WVY+NPPSG+ QDYM FQFP
Sbjct: 1145 GRVPTIVFVWSGLLSIIVSLLWVYINPPSGK-QDYMQFQFP 1184


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