BLASTX nr result

ID: Glycyrrhiza24_contig00020060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020060
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...   220   1e-55
ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su...   203   1e-50
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   190   1e-46
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              190   1e-46
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   176   2e-42

>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1|
           DNA polymerase [Medicago truncatula]
          Length = 611

 Score =  220 bits (560), Expect = 1e-55
 Identities = 104/111 (93%), Positives = 107/111 (96%)
 Frame = +3

Query: 3   DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182
           DETCKHTTRS+SFRLVGDSERGTVCPNYPRCNGHL RKYTEADLYKQLSYFCHVFDTVC 
Sbjct: 501 DETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCY 560

Query: 183 IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335
           IEKMEAKSRIPIEKELIKIRP+VD+AAST QKIRDRCAFGWVKLQDLVV I
Sbjct: 561 IEKMEAKSRIPIEKELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVVAI 611


>ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max]
          Length = 1512

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/111 (86%), Positives = 104/111 (93%)
 Frame = +3

Query: 3    DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182
            DETCKHTTRSIS RLVGDSERGTVCPNYPRCNG L+RKYTEADLYKQLSYFCHVFDTV  
Sbjct: 1402 DETCKHTTRSISLRLVGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVFDTVSC 1461

Query: 183  IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335
            IEKMEAKSRIPIEKELIKIR V+  AASTAQ+IRDRCAFGWVKL++LV+++
Sbjct: 1462 IEKMEAKSRIPIEKELIKIRAVIKSAASTAQEIRDRCAFGWVKLENLVISV 1512


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  190 bits (482), Expect = 1e-46
 Identities = 86/111 (77%), Positives = 99/111 (89%)
 Frame = +3

Query: 3    DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182
            DETCKHTT S++ R++GDSERGTVCPNYPRCNG L+RKYTEADLYKQLSYFCHV DTV  
Sbjct: 1412 DETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRC 1471

Query: 183  IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335
            IEKME  +RIPIEKEL +IRP+V++AAST QKIRDRCA+GWV+L DL VT+
Sbjct: 1472 IEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1522


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  190 bits (482), Expect = 1e-46
 Identities = 86/111 (77%), Positives = 99/111 (89%)
 Frame = +3

Query: 3    DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182
            DETCKHTT S++ R++GDSERGTVCPNYPRCNG L+RKYTEADLYKQLSYFCHV DTV  
Sbjct: 1451 DETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRC 1510

Query: 183  IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335
            IEKME  +RIPIEKEL +IRP+V++AAST QKIRDRCA+GWV+L DL VT+
Sbjct: 1511 IEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1561


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  176 bits (446), Expect = 2e-42
 Identities = 77/110 (70%), Positives = 97/110 (88%)
 Frame = +3

Query: 3    DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182
            DETC +TTRS++ R++GDSERGTVCPNYPRCNGHLLR+YTEADLYKQL+YFC V DTV  
Sbjct: 1451 DETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAYFCFVLDTVRC 1510

Query: 183  IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVT 332
            IEK+E+  R+ +EKEL++IRPVV+ AAST +K RDRCA+ WV+L+DL+V+
Sbjct: 1511 IEKVESNMRLQVEKELVRIRPVVEAAASTVEKFRDRCAYSWVQLKDLIVS 1560


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