BLASTX nr result
ID: Glycyrrhiza24_contig00020060
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00020060 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555... 220 1e-55 ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su... 203 1e-50 ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su... 190 1e-46 emb|CBI21412.3| unnamed protein product [Vitis vinifera] 190 1e-46 gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l... 176 2e-42 >ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1| DNA polymerase [Medicago truncatula] Length = 611 Score = 220 bits (560), Expect = 1e-55 Identities = 104/111 (93%), Positives = 107/111 (96%) Frame = +3 Query: 3 DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182 DETCKHTTRS+SFRLVGDSERGTVCPNYPRCNGHL RKYTEADLYKQLSYFCHVFDTVC Sbjct: 501 DETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCY 560 Query: 183 IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335 IEKMEAKSRIPIEKELIKIRP+VD+AAST QKIRDRCAFGWVKLQDLVV I Sbjct: 561 IEKMEAKSRIPIEKELIKIRPIVDLAASTIQKIRDRCAFGWVKLQDLVVAI 611 >ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max] Length = 1512 Score = 203 bits (516), Expect = 1e-50 Identities = 96/111 (86%), Positives = 104/111 (93%) Frame = +3 Query: 3 DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182 DETCKHTTRSIS RLVGDSERGTVCPNYPRCNG L+RKYTEADLYKQLSYFCHVFDTV Sbjct: 1402 DETCKHTTRSISLRLVGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVFDTVSC 1461 Query: 183 IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335 IEKMEAKSRIPIEKELIKIR V+ AASTAQ+IRDRCAFGWVKL++LV+++ Sbjct: 1462 IEKMEAKSRIPIEKELIKIRAVIKSAASTAQEIRDRCAFGWVKLENLVISV 1512 >ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis vinifera] Length = 1522 Score = 190 bits (482), Expect = 1e-46 Identities = 86/111 (77%), Positives = 99/111 (89%) Frame = +3 Query: 3 DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182 DETCKHTT S++ R++GDSERGTVCPNYPRCNG L+RKYTEADLYKQLSYFCHV DTV Sbjct: 1412 DETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRC 1471 Query: 183 IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335 IEKME +RIPIEKEL +IRP+V++AAST QKIRDRCA+GWV+L DL VT+ Sbjct: 1472 IEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1522 >emb|CBI21412.3| unnamed protein product [Vitis vinifera] Length = 1561 Score = 190 bits (482), Expect = 1e-46 Identities = 86/111 (77%), Positives = 99/111 (89%) Frame = +3 Query: 3 DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182 DETCKHTT S++ R++GDSERGTVCPNYPRCNG L+RKYTEADLYKQLSYFCHV DTV Sbjct: 1451 DETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRC 1510 Query: 183 IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVTI 335 IEKME +RIPIEKEL +IRP+V++AAST QKIRDRCA+GWV+L DL VT+ Sbjct: 1511 IEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1561 >gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum] Length = 1561 Score = 176 bits (446), Expect = 2e-42 Identities = 77/110 (70%), Positives = 97/110 (88%) Frame = +3 Query: 3 DETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLRKYTEADLYKQLSYFCHVFDTVCS 182 DETC +TTRS++ R++GDSERGTVCPNYPRCNGHLLR+YTEADLYKQL+YFC V DTV Sbjct: 1451 DETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAYFCFVLDTVRC 1510 Query: 183 IEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVKLQDLVVT 332 IEK+E+ R+ +EKEL++IRPVV+ AAST +K RDRCA+ WV+L+DL+V+ Sbjct: 1511 IEKVESNMRLQVEKELVRIRPVVEAAASTVEKFRDRCAYSWVQLKDLIVS 1560