BLASTX nr result

ID: Glycyrrhiza24_contig00020050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020050
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556095.1| PREDICTED: DUF246 domain-containing protein ...   247   8e-64
ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein ...   246   2e-63
ref|XP_004150597.1| PREDICTED: DUF246 domain-containing protein ...   233   1e-59
ref|XP_002311505.1| predicted protein [Populus trichocarpa] gi|2...   227   9e-58
ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein ...   223   2e-56

>ref|XP_003556095.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 564

 Score =  247 bits (630), Expect = 8e-64
 Identities = 116/124 (93%), Positives = 119/124 (95%)
 Frame = -1

Query: 374 LYMGTASFDVVPVIKHRPAPGSLYRSPQLYANLRHDMDSDNSSADAISTIWKTPYRGGEW 195
           LYMGTASFDVVPVIKHRPAPGS+YRSPQL+A LR DMDSDNSSADAISTIWK PYRGGEW
Sbjct: 80  LYMGTASFDVVPVIKHRPAPGSVYRSPQLFAKLRLDMDSDNSSADAISTIWKYPYRGGEW 139

Query: 194 KPCVNKSSEGLPESNGYIYVEANGGLNQQRASVCNAVAVAGYLNATLVIPNFHYHSIWKD 15
           KPCVN+SSEGLPESNGYIYVEANGGLNQQR SVCNAVAVAGYLNATLV PNFHYHSIWKD
Sbjct: 140 KPCVNRSSEGLPESNGYIYVEANGGLNQQRTSVCNAVAVAGYLNATLVFPNFHYHSIWKD 199

Query: 14  PSKF 3
           PSKF
Sbjct: 200 PSKF 203


>ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 564

 Score =  246 bits (627), Expect = 2e-63
 Identities = 116/124 (93%), Positives = 119/124 (95%)
 Frame = -1

Query: 374 LYMGTASFDVVPVIKHRPAPGSLYRSPQLYANLRHDMDSDNSSADAISTIWKTPYRGGEW 195
           LYMGTASFDVVPVIKHRPAPGS+YRSPQL+A LR DMDSDNSSADAISTIWK PYRGGEW
Sbjct: 80  LYMGTASFDVVPVIKHRPAPGSVYRSPQLFAKLRLDMDSDNSSADAISTIWKYPYRGGEW 139

Query: 194 KPCVNKSSEGLPESNGYIYVEANGGLNQQRASVCNAVAVAGYLNATLVIPNFHYHSIWKD 15
           KPCVN+SSE LPESNGYIYVEANGGLNQQR SVCNAVAVAGYLNATLVIPNFHYHSIWKD
Sbjct: 140 KPCVNRSSEDLPESNGYIYVEANGGLNQQRTSVCNAVAVAGYLNATLVIPNFHYHSIWKD 199

Query: 14  PSKF 3
           PSKF
Sbjct: 200 PSKF 203


>ref|XP_004150597.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus] gi|449514634|ref|XP_004164435.1| PREDICTED:
           DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 563

 Score =  233 bits (594), Expect = 1e-59
 Identities = 106/124 (85%), Positives = 115/124 (92%)
 Frame = -1

Query: 374 LYMGTASFDVVPVIKHRPAPGSLYRSPQLYANLRHDMDSDNSSADAISTIWKTPYRGGEW 195
           LYMGT SFDVVPVIKHRPAPGS+YRSPQL A LRH+MDSDN+S DAISTIWK  Y+GG+W
Sbjct: 79  LYMGTVSFDVVPVIKHRPAPGSVYRSPQLLAKLRHEMDSDNTSTDAISTIWKHSYKGGQW 138

Query: 194 KPCVNKSSEGLPESNGYIYVEANGGLNQQRASVCNAVAVAGYLNATLVIPNFHYHSIWKD 15
           KPC+N SS GLPESNGYIYVEANGGLNQQR S+CNAVAVAGYLNATLVIPNFH+HSIW+D
Sbjct: 139 KPCINNSSGGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHFHSIWRD 198

Query: 14  PSKF 3
           PSKF
Sbjct: 199 PSKF 202


>ref|XP_002311505.1| predicted protein [Populus trichocarpa] gi|222851325|gb|EEE88872.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  227 bits (578), Expect = 9e-58
 Identities = 100/124 (80%), Positives = 114/124 (91%)
 Frame = -1

Query: 374 LYMGTASFDVVPVIKHRPAPGSLYRSPQLYANLRHDMDSDNSSADAISTIWKTPYRGGEW 195
           LYMGT SFDV P+I H+PAPGS+YRSPQ+Y  LR +MD+DNSSADA+ST+WK  Y+ GEW
Sbjct: 85  LYMGTVSFDVGPIIDHKPAPGSVYRSPQIYEKLRPEMDADNSSADALSTVWKNSYKSGEW 144

Query: 194 KPCVNKSSEGLPESNGYIYVEANGGLNQQRASVCNAVAVAGYLNATLVIPNFHYHSIWKD 15
           +PC+NKSSEGLPESNGYIYVEANGGLNQQR S+CNAVAVAGYLNATL+IPNFHYHSIW+D
Sbjct: 145 RPCINKSSEGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLLIPNFHYHSIWRD 204

Query: 14  PSKF 3
           PSKF
Sbjct: 205 PSKF 208


>ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|297737694|emb|CBI26895.3| unnamed protein
           product [Vitis vinifera]
          Length = 561

 Score =  223 bits (567), Expect = 2e-56
 Identities = 101/124 (81%), Positives = 114/124 (91%)
 Frame = -1

Query: 374 LYMGTASFDVVPVIKHRPAPGSLYRSPQLYANLRHDMDSDNSSADAISTIWKTPYRGGEW 195
           LYMGT SFDVVPVIKHRPAPGS+YRSPQ+YA LR +MDSDNS++D IST+WK  Y+ GEW
Sbjct: 77  LYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLRPEMDSDNSTSDTISTVWKHSYKSGEW 136

Query: 194 KPCVNKSSEGLPESNGYIYVEANGGLNQQRASVCNAVAVAGYLNATLVIPNFHYHSIWKD 15
           +PCVN+SS GLPESNGYIYVEANGGLNQQR S+ NAVAVAGYLNATL+IP+FHYHSIW+D
Sbjct: 137 QPCVNRSSGGLPESNGYIYVEANGGLNQQRTSIGNAVAVAGYLNATLIIPHFHYHSIWRD 196

Query: 14  PSKF 3
           PSKF
Sbjct: 197 PSKF 200


Top