BLASTX nr result

ID: Glycyrrhiza24_contig00020039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020039
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795...   233   7e-59
ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...   227   5e-57
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...   203   8e-50
ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
gb|AFK36549.1| unknown [Lotus japonicus]                              198   3e-48

>ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
          Length = 206

 Score =  233 bits (594), Expect = 7e-59
 Identities = 122/207 (58%), Positives = 129/207 (62%), Gaps = 1/207 (0%)
 Frame = +2

Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRLYYQQFEEQQTQSLIDQRIKEHLXX 316
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 317 XXXXXXXXXXXNPLMAQXXXXXXXXXXXXXXXXGNAPILGSQPLIPGMR-PVFPRPGLVP 493
                      N LM Q                GNA I GSQPL+PGMR PVFPRP    
Sbjct: 61  AAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGSQPLMPGMRPPVFPRPP-GA 119

Query: 494 PGYFSAPAMASTIPPPGAPSIPSQANTLXXXXXXXXXXXXXGNTATPXXXXXXXXXXXXX 673
           PGY SAP M   +PPPGAP  P Q NT+             G+TA P             
Sbjct: 120 PGYVSAPTMPPMLPPPGAPQAPGQLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMVSSAM 179

Query: 674 YQANSSAPSTGGYDSYNANAQAPEGNH 754
           YQAN  APS+G YD+YNA+AQAPEGNH
Sbjct: 180 YQANPPAPSSGSYDNYNASAQAPEGNH 206


>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score =  227 bits (578), Expect = 5e-57
 Identities = 119/207 (57%), Positives = 127/207 (61%), Gaps = 1/207 (0%)
 Frame = +2

Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRLYYQQFEEQQTQSLIDQRIKEHLXX 316
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 317 XXXXXXXXXXXNPLMAQXXXXXXXXXXXXXXXXGNAPILGSQPLIPGMR-PVFPRPGLVP 493
                      N LM Q                GNA I G QPL+ GMR PVFPRP    
Sbjct: 61  AAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPP-GA 119

Query: 494 PGYFSAPAMASTIPPPGAPSIPSQANTLXXXXXXXXXXXXXGNTATPXXXXXXXXXXXXX 673
           PGY SA  M   +PPPGAP +P Q NT+             G+TATP             
Sbjct: 120 PGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAM 179

Query: 674 YQANSSAPSTGGYDSYNANAQAPEGNH 754
           YQAN  APS+G YD+YN +AQAPEGNH
Sbjct: 180 YQANPPAPSSGSYDNYNTSAQAPEGNH 206


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score =  203 bits (516), Expect = 8e-50
 Identities = 109/213 (51%), Positives = 124/213 (58%), Gaps = 7/213 (3%)
 Frame = +2

Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRLYYQQFEEQQTQSLIDQRIKEHLXX 316
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 317 XXXXXXXXXXXNPLMAQ-----XXXXXXXXXXXXXXXXGNAPILGSQPLIPGMR-PVFPR 478
                      N  +                       G+AP+  + PL+PGMR PV PR
Sbjct: 61  TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120

Query: 479 PGLVPPGYFSAPAMASTIPPPGAPSIP-SQANTLXXXXXXXXXXXXXGNTATPXXXXXXX 655
           P    PGY  AP M S + PPGAPS+P    N+L             G+T+TP       
Sbjct: 121 PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPS 180

Query: 656 XXXXXXYQANSSAPSTGGYDSYNANAQAPEGNH 754
                 YQAN + P++GG+DS+N NAQ PE NH
Sbjct: 181 MMTQPMYQANPAGPTSGGFDSFNINAQGPEANH 213


>ref|XP_002304170.1| predicted protein [Populus trichocarpa] gi|222841602|gb|EEE79149.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  201 bits (512), Expect = 2e-49
 Identities = 108/208 (51%), Positives = 120/208 (57%), Gaps = 2/208 (0%)
 Frame = +2

Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRLYYQQFEEQQTQSLIDQRIKEHLXX 316
           MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQS+IDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60

Query: 317 XXXXXXXXXXXNP-LMAQXXXXXXXXXXXXXXXXGNAPILGSQPLIPGMR-PVFPRPGLV 490
                      N  LM Q                 NA      PL PGMR PV PRP   
Sbjct: 61  TAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPIGGNNA------PLFPGMRPPVLPRPMPG 114

Query: 491 PPGYFSAPAMASTIPPPGAPSIPSQANTLXXXXXXXXXXXXXGNTATPXXXXXXXXXXXX 670
            PGY + P M   + PPGAPS+P Q N +             G+TA P            
Sbjct: 115 APGYMNPPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSMGPPV 174

Query: 671 XYQANSSAPSTGGYDSYNANAQAPEGNH 754
            YQAN +A ++GG+DS+N NA APE NH
Sbjct: 175 TYQANQAATTSGGFDSFNVNAAAPEANH 202


>gb|AFK36549.1| unknown [Lotus japonicus]
          Length = 192

 Score =  198 bits (503), Expect = 3e-48
 Identities = 106/208 (50%), Positives = 116/208 (55%), Gaps = 2/208 (0%)
 Frame = +2

Query: 137 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRLYYQQFEEQQTQSLIDQRIKEHLXX 316
           MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHL  
Sbjct: 1   MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60

Query: 317 XXXXXXXXXXXNPLMA--QXXXXXXXXXXXXXXXXGNAPILGSQPLIPGMRPVFPRPGLV 490
                      N LM                    GN  + G QPL+PGMRP+ P P   
Sbjct: 61  AAAFQQVGVAYNHLMVPRPGGPPLLPMPQPRFPMPGNVQMPGGQPLMPGMRPLMPLPR-- 118

Query: 491 PPGYFSAPAMASTIPPPGAPSIPSQANTLXXXXXXXXXXXXXGNTATPXXXXXXXXXXXX 670
                         P PGAP +P Q N +             G+TA P            
Sbjct: 119 --------------PVPGAPHVPGQLNAIPRPPSFAPPTTAPGSTAAPASNGAPSMVSSA 164

Query: 671 XYQANSSAPSTGGYDSYNANAQAPEGNH 754
            YQ N SAPS+GGYD+YNANAQAP+GNH
Sbjct: 165 MYQPNPSAPSSGGYDNYNANAQAPDGNH 192


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