BLASTX nr result

ID: Glycyrrhiza24_contig00020032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020032
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   215   3e-54
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   206   2e-51
ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula] ...   192   3e-47
ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula] ...   192   3e-47
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   162   3e-38

>ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1184

 Score =  215 bits (547), Expect = 3e-54
 Identities = 103/129 (79%), Positives = 115/129 (89%)
 Frame = +1

Query: 1   LKINSSSGHNKAINAVEKMCELVNSFPSKRPTGRVVAVIERSPRREGIVGHLNVKPWASF 180
           LKINS SG +   NAVEKMC LVNSFPSKRPTGRVVA+IERSPRREGIVGH+NVK W SF
Sbjct: 392 LKINSCSGQS---NAVEKMCLLVNSFPSKRPTGRVVAIIERSPRREGIVGHINVKQWVSF 448

Query: 181 REISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMMLLVRELPKCIKKRLESGDATVEMDLV 360
           R+ SKKD KKN NL+ EHEY+QLIPTDPKFPNMMLLVR+LPKCIKKR++SGD T++MDLV
Sbjct: 449 RDTSKKDVKKNKNLISEHEYIQLIPTDPKFPNMMLLVRKLPKCIKKRMKSGDVTIQMDLV 508

Query: 361 AAQIDDWLE 387
           A QIDDW+E
Sbjct: 509 AVQIDDWVE 517


>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1133

 Score =  206 bits (524), Expect = 2e-51
 Identities = 98/129 (75%), Positives = 112/129 (86%)
 Frame = +1

Query: 1   LKINSSSGHNKAINAVEKMCELVNSFPSKRPTGRVVAVIERSPRREGIVGHLNVKPWASF 180
           +K NS SG +   NA+EKMC LVNSFPSKRPTGRVVA++ERSPRREGIVGH+NVK W SF
Sbjct: 340 IKNNSCSGQS---NALEKMCLLVNSFPSKRPTGRVVAIMERSPRREGIVGHINVKQWVSF 396

Query: 181 REISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMMLLVRELPKCIKKRLESGDATVEMDLV 360
           R+  KKD KKN NL+ EHEY+QL PTDPKFPNMMLLVR+LP CIKKR++SGD T+EMDLV
Sbjct: 397 RDTGKKDLKKNKNLISEHEYIQLTPTDPKFPNMMLLVRKLPNCIKKRMKSGDVTIEMDLV 456

Query: 361 AAQIDDWLE 387
           AAQIDDW+E
Sbjct: 457 AAQIDDWVE 465


>ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula]
           gi|355516110|gb|AES97733.1| DIS3-like exonuclease
           [Medicago truncatula]
          Length = 1162

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/129 (72%), Positives = 108/129 (83%)
 Frame = +1

Query: 1   LKINSSSGHNKAINAVEKMCELVNSFPSKRPTGRVVAVIERSPRREGIVGHLNVKPWASF 180
           +KINS SG ++ +NAVEK+C LVNSFPSKRPTGRVVAVIERSPRRE IVGHLNVK W   
Sbjct: 320 IKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGRVVAVIERSPRRECIVGHLNVKQWVFS 379

Query: 181 REISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMMLLVRELPKCIKKRLESGDATVEMDLV 360
           +EI+KKD +KN N V EHEY+QL P DPKFPN+MLLVR+LPK IK RL++GDA +E DLV
Sbjct: 380 QEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIMLLVRDLPKSIKIRLKNGDAAIEKDLV 439

Query: 361 AAQIDDWLE 387
           AAQI DW E
Sbjct: 440 AAQIVDWFE 448


>ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula]
           gi|355516092|gb|AES97715.1| DIS3-like exonuclease
           [Medicago truncatula]
          Length = 1051

 Score =  192 bits (487), Expect = 3e-47
 Identities = 94/129 (72%), Positives = 108/129 (83%)
 Frame = +1

Query: 1   LKINSSSGHNKAINAVEKMCELVNSFPSKRPTGRVVAVIERSPRREGIVGHLNVKPWASF 180
           +KINS SG ++ +NAVEK+C LVNSFPSKRPTGRVVAVIERSPRRE IVGHLNVK W   
Sbjct: 320 IKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGRVVAVIERSPRRECIVGHLNVKQWVFS 379

Query: 181 REISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMMLLVRELPKCIKKRLESGDATVEMDLV 360
           +EI+KKD +KN N V EHEY+QL P DPKFPN+MLLVR+LPK IK RL++GDA +E DLV
Sbjct: 380 QEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIMLLVRDLPKSIKIRLKNGDAAIEKDLV 439

Query: 361 AAQIDDWLE 387
           AAQI DW E
Sbjct: 440 AAQIVDWFE 448


>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
           gi|223546865|gb|EEF48362.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1099

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/125 (62%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = +1

Query: 13  SSSGHNKAINAVEKMCELVNSFPSKRPTGRVVAVIERSPRREGIVGHLNVKPWASFREIS 192
           SS G ++  NAV ++C +++S P+KRPTGRVVA+IERSPRR+ I+G LNVK W   RE  
Sbjct: 306 SSMGQHEGANAVGRLCTMISSHPTKRPTGRVVAIIERSPRRDAIIGFLNVKQWFYCREAC 365

Query: 193 KKDAKKNNN--LVFEHEYVQLIPTDPKFPNMMLLVRELPKCIKKRLESGDATVEMDLVAA 366
           KKD+KKN N   + + EY+QL+PTDPKFP MM+L   LP  IKKRLE GDATVEM+LVAA
Sbjct: 366 KKDSKKNKNSSSISDREYIQLMPTDPKFPKMMVLASSLPDSIKKRLEGGDATVEMELVAA 425

Query: 367 QIDDW 381
           QID+W
Sbjct: 426 QIDNW 430


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