BLASTX nr result

ID: Glycyrrhiza24_contig00020024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020024
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547218.1| PREDICTED: uncharacterized protein LOC100817...   191   5e-47
ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [M...   187   6e-46
ref|XP_003541655.1| PREDICTED: uncharacterized protein LOC100778...   187   1e-45
ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266...    80   1e-13
ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>ref|XP_003547218.1| PREDICTED: uncharacterized protein LOC100817763 [Glycine max]
          Length = 1147

 Score =  191 bits (485), Expect = 5e-47
 Identities = 97/126 (76%), Positives = 108/126 (85%)
 Frame = -3

Query: 383 LPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLGMHNLKIRDNTIQEITRELKRN 204
           LPGF+K K  R NDDK+++++ +IP+KRKTAVHSDSKLGMH LK+RDN I E T  LKRN
Sbjct: 383 LPGFQKSKVHRLNDDKEDKKQFSIPNKRKTAVHSDSKLGMHILKVRDNIIPEATM-LKRN 441

Query: 203 LANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMAAEAMEALCNTGDIVDHVANDA 24
           LANELDEQ N+ CSRGEMEPNAN   QEMLDVGLDTQMAAEAMEALCN GDIVDHVAN+A
Sbjct: 442 LANELDEQFNTDCSRGEMEPNANACAQEMLDVGLDTQMAAEAMEALCNVGDIVDHVANNA 501

Query: 23  TRVTRS 6
           T VTRS
Sbjct: 502 THVTRS 507


>ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
           gi|355483067|gb|AES64270.1| Mediator of DNA damage
           checkpoint protein [Medicago truncatula]
          Length = 1155

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/127 (72%), Positives = 112/127 (88%)
 Frame = -3

Query: 383 LPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLGMHNLKIRDNTIQEITRELKRN 204
           LPG RKIKSRRP  D++EEE+S+IP KRKTA  S+S+LGMHNLKIRD+ IQ  TR+L+RN
Sbjct: 377 LPGCRKIKSRRPKGDEEEEEQSSIPVKRKTAARSESRLGMHNLKIRDDNIQGATRKLERN 436

Query: 203 LANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMAAEAMEALCNTGDIVDHVANDA 24
           +A+ELDEQ++++CSRGEM PN+NE G EMLDVG+DTQ+AAEAMEAL NT ++VDHV NDA
Sbjct: 437 IADELDEQVDANCSRGEMGPNSNEVGHEMLDVGVDTQIAAEAMEALYNTVEVVDHVTNDA 496

Query: 23  TRVTRSR 3
           TRVTRSR
Sbjct: 497 TRVTRSR 503


>ref|XP_003541655.1| PREDICTED: uncharacterized protein LOC100778695 [Glycine max]
          Length = 803

 Score =  187 bits (474), Expect = 1e-45
 Identities = 96/126 (76%), Positives = 106/126 (84%)
 Frame = -3

Query: 383 LPGFRKIKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLGMHNLKIRDNTIQEITRELKRN 204
           LPGF+K K  R NDDK+++++ +IP++RKTAVHSDSKLGMH LK RDN I E T  LKRN
Sbjct: 388 LPGFQKSKVCRLNDDKEDKKQLSIPNRRKTAVHSDSKLGMHILKARDNIIPEATM-LKRN 446

Query: 203 LANELDEQLNSSCSRGEMEPNANEDGQEMLDVGLDTQMAAEAMEALCNTGDIVDHVANDA 24
           LANELDEQ N+ CSRGEMEPNAN    EMLDVGLDTQMAAEAMEALCN GDIVDHVANDA
Sbjct: 447 LANELDEQFNTDCSRGEMEPNANACAPEMLDVGLDTQMAAEAMEALCNVGDIVDHVANDA 506

Query: 23  TRVTRS 6
           T VTRS
Sbjct: 507 THVTRS 512


>ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266667 [Vitis vinifera]
          Length = 1294

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
 Frame = -3

Query: 365 IKSRRPNDDKDEEERSNIPDKRKTAVHSDSKLGMHNLKIRDNTIQEITRELKRNLANELD 186
           +K  + ++ +++EE+  I  K    VHS+ +L   N K  D   Q+   ++K+NLANELD
Sbjct: 484 LKGSQVDEFRNKEEKLKIHHKIMNFVHSEPRLVRPNSKENDKIFQDDNMKIKKNLANELD 543

Query: 185 EQLNSSCSRGEME-PNANEDGQEMLDVGLDTQMAAEAMEAL-----CNTGDI 48
           E+LN+  S GE E   A+ D  +M +VG DTQMAAEAMEAL      N GD+
Sbjct: 544 EELNAESSGGEFEATGADMDVPDMPNVGFDTQMAAEAMEALFYGSSLNNGDV 595


>ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|222863432|gb|EEF00563.1|
           predicted protein [Populus trichocarpa]
          Length = 1102

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/108 (39%), Positives = 64/108 (59%)
 Frame = -3

Query: 338 KDEEERSNIPDKRKTAVHSDSKLGMHNLKIRDNTIQEITRELKRNLANELDEQLNSSCSR 159
           +D E +SN+  +    VHS+SK+ + +L+     +QE    + RNL N+ DEQ  +  S 
Sbjct: 410 RDNEGKSNV--QNVIEVHSESKIDLCSLRANKKMMQETETNVSRNLFNKFDEQPEADTSA 467

Query: 158 GEMEPNANEDGQEMLDVGLDTQMAAEAMEALCNTGDIVDHVANDATRV 15
           G++E    ++  EMLD+GLDTQMAAEAMEAL +   I     ND  ++
Sbjct: 468 GQLEALTRKEVPEMLDIGLDTQMAAEAMEALFHGEGIAYDATNDGQQI 515


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