BLASTX nr result

ID: Glycyrrhiza24_contig00020021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020021
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochond...   412   e-113
ref|XP_003552260.1| PREDICTED: LOW QUALITY PROTEIN: protein SCO1...   405   e-110
ref|XP_004148614.1| PREDICTED: protein SCO1 homolog 1, mitochond...   366   8e-99
ref|XP_002882593.1| electron transport SCO1/SenC family protein ...   348   2e-93
gb|AAF07830.1|AC010871_6 putative SCO1 protein [Arabidopsis thal...   344   3e-92

>ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Glycine max]
          Length = 332

 Score =  412 bits (1060), Expect = e-113
 Identities = 222/328 (67%), Positives = 236/328 (71%), Gaps = 5/328 (1%)
 Frame = +1

Query: 43   MASIISSKTNHLRYATHSLCSHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGNQGYGN 222
            MA I+SSK N  RY+T  L SHL                             VGNQGYGN
Sbjct: 1    MAYIVSSKVNQFRYSTRLLFSHLLRHGRPSTLLPPFSSHLQPLHHPHQ----VGNQGYGN 56

Query: 223  GSLALLCQRFLSGXXXXXXXXXX--HEKPASDNXXXXXXXXXXXXXXXXXXXXX---DAG 387
            GSL L C R LS              EKPA D+                        DAG
Sbjct: 57   GSLGL-CPRLLSSSSSSDASAANVSGEKPALDSDQSAKDGSGKERESGSGGGQDQKSDAG 115

Query: 388  KPVRGSPVSWLSFLLLVLTGAGLVFYYDREKKRHIEEIHNASEAVKQGPSAGKAAIGGPF 567
            K VRG PVSWLSFLLLVLTGAGLVFYYDREKKRHIE I   +EAVKQGPSAGKAAIGGPF
Sbjct: 116  KSVRGGPVSWLSFLLLVLTGAGLVFYYDREKKRHIEGIRTNTEAVKQGPSAGKAAIGGPF 175

Query: 568  QLTDHYGRRVTEKDFMGKWTLMYFGFTHCPDICPEELQKLAAAVDKIKEKGGIETVPVFI 747
             L +H+G+ VTEKDFMGKWTL+YFGFTHCPDICPEELQKLAAAVDKIKEK GIETVPVFI
Sbjct: 176  CLINHHGKHVTEKDFMGKWTLLYFGFTHCPDICPEELQKLAAAVDKIKEKAGIETVPVFI 235

Query: 748  SVDPERDTVQQVGEYVKEFHPKLIGLTGSSEEIKSVARAYRVYYMKTAEEDSDYLVDHSI 927
            SVDPERDTV+QVGEYVKEFHPKLIGLTGS +E+K+VARAYRVYYMKTAEEDSDYLVDHSI
Sbjct: 236  SVDPERDTVEQVGEYVKEFHPKLIGLTGSPDEVKNVARAYRVYYMKTAEEDSDYLVDHSI 295

Query: 928  VIYLMGPDMQFVKFFGKNNDADSLADGV 1011
            VIYLM P+M+FVKFFGKNND DSLADGV
Sbjct: 296  VIYLMSPEMEFVKFFGKNNDVDSLADGV 323


>ref|XP_003552260.1| PREDICTED: LOW QUALITY PROTEIN: protein SCO1 homolog 1,
            mitochondrial-like [Glycine max]
          Length = 331

 Score =  405 bits (1040), Expect = e-110
 Identities = 219/327 (66%), Positives = 233/327 (71%), Gaps = 4/327 (1%)
 Frame = +1

Query: 43   MASIISSKTNHLRYATHSLCSHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGNQGYGN 222
            MASI+S+K N  RY+T  L SHL                             V NQ YGN
Sbjct: 1    MASIVSTKANQFRYSTRLLFSHLLRQGRPSTLSPPFSSHLQPLHHPYK----VRNQSYGN 56

Query: 223  GSLALLCQRFLSGXXXXXXXXXXHEKPASDNXXXXXXXXXXXXXXXXXXXXX---DAGKP 393
            GSL L CQRFLS            EKPASD+                        DAGK 
Sbjct: 57   GSLRL-CQRFLSSSSSPPAANVSGEKPASDSDHSAKDGSGQGKESGSGGDEGQKSDAGKS 115

Query: 394  VRGSPVSWLSFLLLVLTGAGLVFYYDREKKRHIEE-IHNASEAVKQGPSAGKAAIGGPFQ 570
            VRG PVSWLSFLLLVLTGAGLVFYYDREKKRHI   I   S AVKQGPS G AAIGGPF 
Sbjct: 116  VRGGPVSWLSFLLLVLTGAGLVFYYDREKKRHIXRXITMVSLAVKQGPSVGTAAIGGPFH 175

Query: 571  LTDHYGRRVTEKDFMGKWTLMYFGFTHCPDICPEELQKLAAAVDKIKEKGGIETVPVFIS 750
            L +H+G+ VTEKD +GKWTL+YFGFTHCPDICPEELQKLAAAVDKIKEK GIETVPVFIS
Sbjct: 176  LVNHHGKHVTEKDXLGKWTLLYFGFTHCPDICPEELQKLAAAVDKIKEKAGIETVPVFIS 235

Query: 751  VDPERDTVQQVGEYVKEFHPKLIGLTGSSEEIKSVARAYRVYYMKTAEEDSDYLVDHSIV 930
            VDPERDTV+QVGEYVKEFHPKLIGLTGS +EIK+VARAYRVYYMKTAEEDSDYLVDHSIV
Sbjct: 236  VDPERDTVEQVGEYVKEFHPKLIGLTGSPDEIKNVARAYRVYYMKTAEEDSDYLVDHSIV 295

Query: 931  IYLMGPDMQFVKFFGKNNDADSLADGV 1011
            IYLM P+M+FVKFFGKNND DSLADGV
Sbjct: 296  IYLMSPEMKFVKFFGKNNDVDSLADGV 322


>ref|XP_004148614.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Cucumis
            sativus]
          Length = 324

 Score =  366 bits (939), Expect = 8e-99
 Identities = 179/212 (84%), Positives = 195/212 (91%), Gaps = 1/212 (0%)
 Frame = +1

Query: 379  DAGKPVRGSPVSWLSFLLLVLTGAGLVFYYDREKKRHIEEIHNASEAVKQGPSAGKAAIG 558
            DAGKPVRG PVSWLSFLLLV TGAGLVFYYDREKKRHIEEI+ AS  VKQGPS GKAAIG
Sbjct: 105  DAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASTEVKQGPSVGKAAIG 164

Query: 559  GPFQLTDHYGRRVTEKDFMGKWTLMYFGFTHCPDICPEELQKLAAAVDKIKEKGGIETVP 738
            GPF+L +H G++VTEKDF GKWTL+YFGFTHCPDICP+ELQKLAAAVDKIK K GI+ VP
Sbjct: 165  GPFKLVNHDGKQVTEKDFFGKWTLLYFGFTHCPDICPDELQKLAAAVDKIK-KAGIKIVP 223

Query: 739  VFISVDPERDTVQQVGEYVKEFHPKLIGLTGSSEEIKSVARAYRVYYMKTAEEDSDYLVD 918
            VFISVDPERDTV+QV EYVKEFHP L+GLTGSS+EI++VARAYRVYYMKT EEDSDYLVD
Sbjct: 224  VFISVDPERDTVEQVREYVKEFHPDLVGLTGSSDEIRNVARAYRVYYMKTEEEDSDYLVD 283

Query: 919  HSIVIYLMGPD-MQFVKFFGKNNDADSLADGV 1011
            HSIV+YLMGP+ M+FVKFFGKNND DSLADGV
Sbjct: 284  HSIVMYLMGPEKMEFVKFFGKNNDVDSLADGV 315


>ref|XP_002882593.1| electron transport SCO1/SenC family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297328433|gb|EFH58852.1| electron
            transport SCO1/SenC family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 334

 Score =  348 bits (893), Expect = 2e-93
 Identities = 166/210 (79%), Positives = 185/210 (88%)
 Frame = +1

Query: 382  AGKPVRGSPVSWLSFLLLVLTGAGLVFYYDREKKRHIEEIHNASEAVKQGPSAGKAAIGG 561
            +GK VRG PVSW+SF LL  TGAGLV+YYDREKKRHIE+I+  S AVK+GPSAGKAAIGG
Sbjct: 116  SGKDVRGGPVSWMSFFLLFATGAGLVYYYDREKKRHIEDINKNSIAVKEGPSAGKAAIGG 175

Query: 562  PFQLTDHYGRRVTEKDFMGKWTLMYFGFTHCPDICPEELQKLAAAVDKIKEKGGIETVPV 741
            PF L    G+RVTEKD MGKW+++YFGFTHCPDICP+EL KLAAA+DKIKE  G++ VPV
Sbjct: 176  PFNLIRDDGKRVTEKDLMGKWSILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPV 235

Query: 742  FISVDPERDTVQQVGEYVKEFHPKLIGLTGSSEEIKSVARAYRVYYMKTAEEDSDYLVDH 921
            FISVDPERDTVQQV EYVKEFHPKLIGLTGS EEIKSVAR+YRVYYMKT EEDSDYLVDH
Sbjct: 236  FISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDH 295

Query: 922  SIVIYLMGPDMQFVKFFGKNNDADSLADGV 1011
            SIV+YLM P+M FVKF+GKN+D DSL DGV
Sbjct: 296  SIVMYLMSPEMNFVKFYGKNHDVDSLTDGV 325


>gb|AAF07830.1|AC010871_6 putative SCO1 protein [Arabidopsis thaliana]
          Length = 273

 Score =  344 bits (883), Expect = 3e-92
 Identities = 164/210 (78%), Positives = 184/210 (87%)
 Frame = +1

Query: 382  AGKPVRGSPVSWLSFLLLVLTGAGLVFYYDREKKRHIEEIHNASEAVKQGPSAGKAAIGG 561
            +GK VRG PVSW+SF LL  TGAGLV+YYD +KKRHIE+I+  S AVK+GPSAGKAAIGG
Sbjct: 55   SGKDVRGGPVSWMSFFLLFATGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGG 114

Query: 562  PFQLTDHYGRRVTEKDFMGKWTLMYFGFTHCPDICPEELQKLAAAVDKIKEKGGIETVPV 741
            PF L    G+RVTEK+ MGKWT++YFGFTHCPDICP+EL KLAAA+DKIKE  G++ VPV
Sbjct: 115  PFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPV 174

Query: 742  FISVDPERDTVQQVGEYVKEFHPKLIGLTGSSEEIKSVARAYRVYYMKTAEEDSDYLVDH 921
            FISVDPERDTVQQV EYVKEFHPKLIGLTGS EEIKSVAR+YRVYYMKT EEDSDYLVDH
Sbjct: 175  FISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDH 234

Query: 922  SIVIYLMGPDMQFVKFFGKNNDADSLADGV 1011
            SIV+YLM P+M FVKF+GKN+D DSL DGV
Sbjct: 235  SIVMYLMSPEMNFVKFYGKNHDVDSLTDGV 264


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