BLASTX nr result

ID: Glycyrrhiza24_contig00020012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020012
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [G...    84   5e-29
gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]      65   7e-19
ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatu...    65   7e-19
ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [C...    60   7e-18
ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [G...    75   1e-17

>ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 517

 Score = 83.6 bits (205), Expect(2) = 5e-29
 Identities = 42/64 (65%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +1

Query: 316 ELFWQNGQVVMQSQNHRPLRKPPPARNSDDAT---PSSARDTRPEEENHNQYLFMQEGEM 486
           EL W NGQVV+QSQN R LRK PP  NS DA+   PS  R+ RP  EN NQ+LFM EGEM
Sbjct: 45  ELLWHNGQVVVQSQNQRSLRKLPPVTNSHDASPAGPSMTREIRPLVENFNQHLFMHEGEM 104

Query: 487 ASWL 498
           ASWL
Sbjct: 105 ASWL 108



 Score = 69.3 bits (168), Expect(2) = 5e-29
 Identities = 34/45 (75%), Positives = 35/45 (77%), Gaps = 4/45 (8%)
 Frame = +2

Query: 107 NHCVPDFDTQMD-DQDYPI---SGLPRPKKPSIADDDIMELFWQN 229
           NHCVPDFD QMD D +YPI   S LPR KKPSIADDDIMEL W N
Sbjct: 6   NHCVPDFDIQMDHDHEYPILTPSALPRQKKPSIADDDIMELLWHN 50


>gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 484

 Score = 65.1 bits (157), Expect(2) = 7e-19
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = +1

Query: 316 ELFWQNGQVVMQSQNHRPLRKPPPARNSDDATPSSARDTRPEEENHNQYLFMQEGEMASW 495
           EL WQNGQVV Q  NHR  +KPP  + +     +S        EN+NQYLFMQE EMASW
Sbjct: 33  ELLWQNGQVVTQRPNHRHAKKPPSCQETTRGGGAS------PVENYNQYLFMQENEMASW 86

Query: 496 L 498
           L
Sbjct: 87  L 87



 Score = 53.5 bits (127), Expect(2) = 7e-19
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = +2

Query: 107 NHCVPDFDTQMDDQDYPISGLPRPKKPSIADDDIMELFWQN 229
           N+CV  F +QMD Q      LPRPKKP IADD+IMEL WQN
Sbjct: 3   NYCVSYFQSQMDQQR-----LPRPKKPIIADDEIMELLWQN 38


>ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
           gi|355500490|gb|AES81693.1| Transcription factor PIF1
           [Medicago truncatula]
          Length = 467

 Score = 65.1 bits (157), Expect(2) = 7e-19
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = +1

Query: 316 ELFWQNGQVVMQSQNHRPLRKPPPARNSDDATPSSARDTRPEEENHNQYLFMQEGEMASW 495
           EL WQNGQVV Q  NHR  +KPP  + +     +S        EN+NQYLFMQE EMASW
Sbjct: 33  ELLWQNGQVVTQRPNHRHAKKPPSCQETTRGGGAS------PVENYNQYLFMQENEMASW 86

Query: 496 L 498
           L
Sbjct: 87  L 87



 Score = 53.5 bits (127), Expect(2) = 7e-19
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = +2

Query: 107 NHCVPDFDTQMDDQDYPISGLPRPKKPSIADDDIMELFWQN 229
           N+CV  F +QMD Q      LPRPKKP IADD+IMEL WQN
Sbjct: 3   NYCVSYFQSQMDQQR-----LPRPKKPIIADDEIMELLWQN 38


>ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
          Length = 529

 Score = 60.5 bits (145), Expect(2) = 7e-18
 Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = +1

Query: 316 ELFWQNGQVVMQSQNHRPLRKPPPARNSDDATP---SSARDTRPE---EENHNQYLFMQE 477
           EL WQNGQVV  SQN R  RK PP++  D + P   ++ R+ RP    EE+H   LFMQE
Sbjct: 43  ELLWQNGQVVTHSQNQRSFRKSPPSK-FDVSIPQEQAATREIRPSTQLEEHHE--LFMQE 99

Query: 478 GEMASWL 498
            EMASWL
Sbjct: 100 DEMASWL 106



 Score = 54.7 bits (130), Expect(2) = 7e-18
 Identities = 24/42 (57%), Positives = 28/42 (66%)
 Frame = +2

Query: 104 MNHCVPDFDTQMDDQDYPISGLPRPKKPSIADDDIMELFWQN 229
           MNHCVPDF+   D      S L RP+K S+ DDD+MEL WQN
Sbjct: 7   MNHCVPDFEMADDFSLPTFSSLTRPRKSSLPDDDVMELLWQN 48


>ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 491

 Score = 74.7 bits (182), Expect(2) = 1e-17
 Identities = 40/63 (63%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = +1

Query: 316 ELFWQNGQVVMQSQNHRPLRKPPPARNSDDATPSSARDTRPEE-ENHN-QYLFMQEGEMA 489
           EL WQNGQVVMQ+QN RP RK PP  + D   P  AR+ R  E EN+N Q+LFMQE EMA
Sbjct: 25  ELLWQNGQVVMQNQNQRPFRKQPPTTDGDGPIP--AREIRSSEAENYNSQHLFMQEDEMA 82

Query: 490 SWL 498
           SWL
Sbjct: 83  SWL 85



 Score = 39.7 bits (91), Expect(2) = 1e-17
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = +2

Query: 140 DDQDYPISGLPRPKKPSIADDDIMELFWQN 229
           DD++YPI   P  KKPS  +D+IMEL WQN
Sbjct: 4   DDEEYPI---PVSKKPSTQNDEIMELLWQN 30


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