BLASTX nr result

ID: Glycyrrhiza24_contig00019985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019985
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517548.1| PREDICTED: cellulose synthase-like protein D...   218   3e-55
ref|XP_003537778.1| PREDICTED: cellulose synthase-like protein D...   218   4e-55
ref|XP_002274896.1| PREDICTED: cellulose synthase-like protein D...   213   1e-53
emb|CAN83176.1| hypothetical protein VITISV_042740 [Vitis vinifera]   213   1e-53
ref|XP_004156753.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   212   2e-53

>ref|XP_003517548.1| PREDICTED: cellulose synthase-like protein D3-like [Glycine max]
          Length = 1143

 Score =  218 bits (556), Expect = 3e-55
 Identities = 115/139 (82%), Positives = 115/139 (82%)
 Frame = +2

Query: 2    AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 181
            AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK
Sbjct: 916  AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 975

Query: 182  WSGIELEEWWRNEQFXXXXXXXXXXXXXXXXXWWRNEQFWLIGGTSAHLAAVLQGLLKVI 361
            WSGIELEEWW                        RNEQFWLIGGTSAHLAAVLQGLLKVI
Sbjct: 976  WSGIELEEWW------------------------RNEQFWLIGGTSAHLAAVLQGLLKVI 1011

Query: 362  AGIEISFTLTSKSGGDDVD 418
            AGIEISFTLTSKSGGDDVD
Sbjct: 1012 AGIEISFTLTSKSGGDDVD 1030


>ref|XP_003537778.1| PREDICTED: cellulose synthase-like protein D3-like [Glycine max]
          Length = 1143

 Score =  218 bits (555), Expect = 4e-55
 Identities = 114/139 (82%), Positives = 115/139 (82%)
 Frame = +2

Query: 2    AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 181
            AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK
Sbjct: 916  AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 975

Query: 182  WSGIELEEWWRNEQFXXXXXXXXXXXXXXXXXWWRNEQFWLIGGTSAHLAAVLQGLLKVI 361
            WSGIELEEWW                        RNEQFWLIGGTSAHLAAVLQGLLKV+
Sbjct: 976  WSGIELEEWW------------------------RNEQFWLIGGTSAHLAAVLQGLLKVV 1011

Query: 362  AGIEISFTLTSKSGGDDVD 418
            AGIEISFTLTSKSGGDDVD
Sbjct: 1012 AGIEISFTLTSKSGGDDVD 1030


>ref|XP_002274896.1| PREDICTED: cellulose synthase-like protein D3-like [Vitis vinifera]
          Length = 1149

 Score =  213 bits (543), Expect = 1e-53
 Identities = 112/139 (80%), Positives = 114/139 (82%)
 Frame = +2

Query: 2    AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 181
            AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFL+YLL ITVTLCMLAVLEIK
Sbjct: 922  AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLVITVTLCMLAVLEIK 981

Query: 182  WSGIELEEWWRNEQFXXXXXXXXXXXXXXXXXWWRNEQFWLIGGTSAHLAAVLQGLLKVI 361
            WSGIELEEWW                        RNEQFWLIGGTSAHLAAVLQGLLKVI
Sbjct: 982  WSGIELEEWW------------------------RNEQFWLIGGTSAHLAAVLQGLLKVI 1017

Query: 362  AGIEISFTLTSKSGGDDVD 418
            AGIEISFTLTSKSGGDD+D
Sbjct: 1018 AGIEISFTLTSKSGGDDID 1036


>emb|CAN83176.1| hypothetical protein VITISV_042740 [Vitis vinifera]
          Length = 235

 Score =  213 bits (543), Expect = 1e-53
 Identities = 112/139 (80%), Positives = 114/139 (82%)
 Frame = +2

Query: 2   AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 181
           AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFL+YLL ITVTLCMLAVLEIK
Sbjct: 8   AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLVITVTLCMLAVLEIK 67

Query: 182 WSGIELEEWWRNEQFXXXXXXXXXXXXXXXXXWWRNEQFWLIGGTSAHLAAVLQGLLKVI 361
           WSGIELEEWW                        RNEQFWLIGGTSAHLAAVLQGLLKVI
Sbjct: 68  WSGIELEEWW------------------------RNEQFWLIGGTSAHLAAVLQGLLKVI 103

Query: 362 AGIEISFTLTSKSGGDDVD 418
           AGIEISFTLTSKSGGDD+D
Sbjct: 104 AGIEISFTLTSKSGGDDID 122


>ref|XP_004156753.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase-like protein
            D3-like [Cucumis sativus]
          Length = 1148

 Score =  212 bits (540), Expect = 2e-53
 Identities = 111/139 (79%), Positives = 114/139 (82%)
 Frame = +2

Query: 2    AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIK 181
            AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFL+YLL IT+TLC+LAVLEIK
Sbjct: 921  AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLVITITLCLLAVLEIK 980

Query: 182  WSGIELEEWWRNEQFXXXXXXXXXXXXXXXXXWWRNEQFWLIGGTSAHLAAVLQGLLKVI 361
            WSGIELEEWW                        RNEQFWLIGGTSAHLAAVLQGLLKVI
Sbjct: 981  WSGIELEEWW------------------------RNEQFWLIGGTSAHLAAVLQGLLKVI 1016

Query: 362  AGIEISFTLTSKSGGDDVD 418
            AGIEISFTLTSKSGGDDVD
Sbjct: 1017 AGIEISFTLTSKSGGDDVD 1035


Top