BLASTX nr result
ID: Glycyrrhiza24_contig00019945
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00019945 (446 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicag... 266 2e-69 ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2... 251 3e-65 ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2... 209 2e-52 emb|CBI28192.3| unnamed protein product [Vitis vinifera] 209 2e-52 ref|XP_002524488.1| hypothetical protein RCOM_0223370 [Ricinus c... 198 3e-49 >ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicago truncatula] gi|355500517|gb|AES81720.1| Nuclear pore complex protein Nup205 [Medicago truncatula] Length = 2047 Score = 266 bits (679), Expect = 2e-69 Identities = 137/148 (92%), Positives = 141/148 (95%) Frame = +3 Query: 3 QCERYVLDSRGSLVERQAVVSRERLILGHCLVLSVLVVRTSPKDVKDLFYVLKDSVSGVS 182 QCERYV+DSRGSLVERQAVVSRERLILGHCLVLSVL+VRTSPKDVKDLF VLKDS S VS Sbjct: 295 QCERYVIDSRGSLVERQAVVSRERLILGHCLVLSVLIVRTSPKDVKDLFSVLKDSASEVS 354 Query: 183 ESNTTIKHQITFSLLFALVIAFVSDGLGTVPDKASVLSSDTSFRHEFHALVMATGNDPIV 362 +SNT IKHQITFSLLFALVIAFVSDGL TVPDKASVLSS+TSFRHEFH LVMATGNDPIV Sbjct: 355 QSNTAIKHQITFSLLFALVIAFVSDGLSTVPDKASVLSSNTSFRHEFHELVMATGNDPIV 414 Query: 363 EGFTGGIRLAWVVHLMLIQDVVAARETV 446 EGFTGGIRLAWVVHLMLIQD VAARETV Sbjct: 415 EGFTGGIRLAWVVHLMLIQDGVAARETV 442 >ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max] Length = 1931 Score = 251 bits (642), Expect = 3e-65 Identities = 128/148 (86%), Positives = 134/148 (90%) Frame = +3 Query: 3 QCERYVLDSRGSLVERQAVVSRERLILGHCLVLSVLVVRTSPKDVKDLFYVLKDSVSGVS 182 QCE YVLDSRGSLVERQAVVSRERLILGHCLVLS+LVVRT PKD+KD+F VLKDS S VS Sbjct: 190 QCESYVLDSRGSLVERQAVVSRERLILGHCLVLSILVVRTCPKDIKDIFSVLKDSASEVS 249 Query: 183 ESNTTIKHQITFSLLFALVIAFVSDGLGTVPDKASVLSSDTSFRHEFHALVMATGNDPIV 362 ESN T+KHQITF LLFALVIAFVSDGL TVPDKASVLSS+TSFRHEFH LVM TGNDP V Sbjct: 250 ESNATVKHQITFCLLFALVIAFVSDGLSTVPDKASVLSSNTSFRHEFHELVMTTGNDPHV 309 Query: 363 EGFTGGIRLAWVVHLMLIQDVVAARETV 446 EGF GGIRLAWVVHLMLIQD V ARET+ Sbjct: 310 EGFVGGIRLAWVVHLMLIQDGVPARETI 337 >ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis vinifera] Length = 1934 Score = 209 bits (531), Expect = 2e-52 Identities = 106/146 (72%), Positives = 121/146 (82%) Frame = +3 Query: 9 ERYVLDSRGSLVERQAVVSRERLILGHCLVLSVLVVRTSPKDVKDLFYVLKDSVSGVSES 188 ERYVLDSRG+LVER+AVV RERLILGHCLVLSVLVVRTSPKDVKDLF LKD + ++ S Sbjct: 192 ERYVLDSRGALVERRAVVFRERLILGHCLVLSVLVVRTSPKDVKDLFSTLKDCAAELNGS 251 Query: 189 NTTIKHQITFSLLFALVIAFVSDGLGTVPDKASVLSSDTSFRHEFHALVMATGNDPIVEG 368 + TIK+QITFS+LF+LVIAF+SD LGTVPDKASVL D +FR EF +V+A+GNDPI EG Sbjct: 252 SDTIKYQITFSILFSLVIAFISDALGTVPDKASVLCRDATFRREFQEIVIASGNDPIAEG 311 Query: 369 FTGGIRLAWVVHLMLIQDVVAARETV 446 F IRLAW HLML+QD A ETV Sbjct: 312 FVDVIRLAWAAHLMLVQDATVATETV 337 >emb|CBI28192.3| unnamed protein product [Vitis vinifera] Length = 1889 Score = 209 bits (531), Expect = 2e-52 Identities = 106/146 (72%), Positives = 121/146 (82%) Frame = +3 Query: 9 ERYVLDSRGSLVERQAVVSRERLILGHCLVLSVLVVRTSPKDVKDLFYVLKDSVSGVSES 188 ERYVLDSRG+LVER+AVV RERLILGHCLVLSVLVVRTSPKDVKDLF LKD + ++ S Sbjct: 192 ERYVLDSRGALVERRAVVFRERLILGHCLVLSVLVVRTSPKDVKDLFSTLKDCAAELNGS 251 Query: 189 NTTIKHQITFSLLFALVIAFVSDGLGTVPDKASVLSSDTSFRHEFHALVMATGNDPIVEG 368 + TIK+QITFS+LF+LVIAF+SD LGTVPDKASVL D +FR EF +V+A+GNDPI EG Sbjct: 252 SDTIKYQITFSILFSLVIAFISDALGTVPDKASVLCRDATFRREFQEIVIASGNDPIAEG 311 Query: 369 FTGGIRLAWVVHLMLIQDVVAARETV 446 F IRLAW HLML+QD A ETV Sbjct: 312 FVDVIRLAWAAHLMLVQDATVATETV 337 >ref|XP_002524488.1| hypothetical protein RCOM_0223370 [Ricinus communis] gi|223536276|gb|EEF37928.1| hypothetical protein RCOM_0223370 [Ricinus communis] Length = 1270 Score = 198 bits (504), Expect = 3e-49 Identities = 102/156 (65%), Positives = 119/156 (76%), Gaps = 9/156 (5%) Frame = +3 Query: 6 CERYVLDSRGSLVERQAVVSRERLILGHCLVLSVLVVRTSPKDVKDLFYVLKDSVSGVSE 185 C+ YVLDSRG+L ER+AVV +ER +LGHCLVLSVLVVR S KDVKD+ Y LKDS S + E Sbjct: 224 CDHYVLDSRGALSERRAVVHKERHLLGHCLVLSVLVVRISSKDVKDVIYTLKDSASELVE 283 Query: 186 SNTTIKHQ---------ITFSLLFALVIAFVSDGLGTVPDKASVLSSDTSFRHEFHALVM 338 N T+KHQ I F LLF+LVIAF+SD L +PDKAS+LS D SFR EFH ++M Sbjct: 284 VNGTLKHQAFIILFSLQIAFCLLFSLVIAFMSDALSALPDKASILSCDASFRKEFHEILM 343 Query: 339 ATGNDPIVEGFTGGIRLAWVVHLMLIQDVVAARETV 446 AT NDP+VEGF GG+RLAW VHLMLI DV+ ARE V Sbjct: 344 ATENDPVVEGFIGGVRLAWSVHLMLINDVITAREEV 379